PROTEIN: HRGMv2_2521_1_139
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Protein File & Metadata
Source:
HRGMv2_2521_1_139.pdb
Genome ID:
Protein ID:
HRGMv2_2521_1_139
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Detailed structural information will appear here after analysis...
Protein Sequence
MADLWKDINK IEYEGPHKDI KSGLFYQYYN PEEVILGKKM KDWLRFAVAY WHTFDQRLVD 60 PFGDGTAQRP YDKYSDPMDC ALAKVDYAFE FYNKLGVNFL CFHDRDLAPE GDTLRETNKN 120 LDKVVDKIVE YQKATGMKVL WNTSNLFTNP RFLEGAGTAP SAEIYAYAAA QLKHSLEIGK 180 RVGSENYVFW GGREGYESLW NTDMKREQSH IAKFFHMAKD YANEIGFDAQ MLLEPKPKEP 240 TTHQYDFDAA TTINFMREYG LDKDFKLNLE GNHANLAGHT YQHEIRVARE AGLLGSLDAN 300 QGDKLIGWDI DEYPSNLYET TAAMWEVVEN GSIGPRGGLN FDAKPRRTSF TPKDLFYGHI 360 VGMDSFAAGL RVAAAMKEDG FLDDIIKKRY ATWDEGLGKS IEDGNENFAS LEEKVIDTPQ 420 SELIAATHSD HLEEIKDTIN HYIIETLAK 449
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44398-F1-model_v4 | 1 | 445 | 1 | 439 | 0.9537 |
0.9719 |
| AF-A0A0H3GR15-F1-model_v4 | 1 | 445 | 1 | 439 | 0.9514 |
0.9699 |
| AF-P00944-F1-model_v4 | 1 | 448 | 1 | 440 | 0.9509 |
0.9685 |
| AF-A0A0H3H006-F1-model_v4 | 1 | 446 | 1 | 440 | 0.9504 |
0.968 |
| AF-Q8ZL90-F1-model_v4 | 1 | 448 | 1 | 440 | 0.9497 |
0.9674 |
| AF-Q9FKK7-F1-model_v4 | 1 | 443 | 42 | 477 | 0.9195 |
0.9807 |
| AF-Q8H3Q7-F1-model_v4 | 1 | 443 | 44 | 479 | 0.9169 |
0.98 |
| AF-I1MSU1-F1-model_v4 | 1 | 443 | 45 | 480 | 0.9161 |
0.98 |
| AF-A0A1D6F3V1-F1-model_v4 | 1 | 443 | 47 | 493 | 0.9058 |
0.9659 |
| AF-A0A1D6ING2-F1-model_v4 | 1 | 443 | 49 | 494 | 0.903 |
0.9641 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1a0e-assembly1.cif.gz_A | 2 | 449 | 1 | 441 | 0.971 |
0.9871 |
| 1a0d-assembly1.cif.gz_A | 3 | 449 | 1 | 437 | 0.9695 |
0.9877 |
| 1a0c-assembly1.cif.gz_A | 2 | 445 | 1 | 437 | 0.9657 |
0.9844 |
| 6t8f-assembly1.cif.gz_D | 1 | 443 | 1 | 436 | 0.9547 |
0.9758 |
| 5nh4-assembly1.cif.gz_C | 1 | 443 | 1 | 436 | 0.954 |
0.9751 |
| 4xkm-assembly2.cif.gz_E | 2 | 443 | 1 | 435 | 0.9532 |
0.9754 |
| 6int-assembly1.cif.gz_B | 5 | 446 | 1 | 412 | 0.9407 |
0.9861 |
| 1bxc-assembly1.cif.gz_A | 15 | 448 | 1 | 387 | 0.8438 |
0.9181 |
| 1bxb-assembly1.cif.gz_D | 15 | 449 | 1 | 387 | 0.8438 |
0.918 |
| 1qt1-assembly1.cif.gz_A | 15 | 449 | 1 | 387 | 0.8378 |
0.9119 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29443-F1-model_v4 | 1 | 449 | 2 | 449 | 0.9911 |
0.9966 |
| AF-Q03TX3-F1-model_v4 | 1 | 449 | 2 | 449 | 0.991 |
0.9966 |
| AF-P21938-F1-model_v4 | 1 | 449 | 2 | 449 | 0.9907 |
0.9963 |
| AF-Q03HN1-F1-model_v4 | 1 | 449 | 1 | 447 | 0.9903 |
0.9961 |
| AF-B3DR33-F1-model_v4 | 2 | 449 | 1 | 447 | 0.9881 |
0.996 |
| AF-Q8G3Q1-F1-model_v4 | 2 | 449 | 1 | 447 | 0.988 |
0.9959 |
| AF-A1A0H0-F1-model_v4 | 2 | 449 | 1 | 448 | 0.9869 |
0.9928 |
| AF-Q5WKJ3-F1-model_v4 | 2 | 448 | 1 | 439 | 0.9755 |
0.9909 |
| AF-Q8ELU7-F1-model_v4 | 2 | 449 | 1 | 439 | 0.9754 |
0.9908 |
| AF-Q9K993-F1-model_v4 | 2 | 449 | 1 | 440 | 0.9753 |
0.9897 |