PROTEIN: HRGMv2_2520_14_18
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Protein File & Metadata
Source:
HRGMv2_2520_14_18.pdb
Genome ID:
Protein ID:
HRGMv2_2520_14_18
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Protein Sequence
MNNTPSQKSI YIWNLLGNFA AAAVSVLYLL IVSRMQTSEV ADQFSLATSI GNLWIIIGQF 60 QVRNYQATDV NSSHPFSAYF FTRLLTVVLM LITLLPYLRI INYDFTNSSL MIITWIIVYR 120 VADAFSDLFQ GYFQQHGRLD IAGKAMVYRY ALSVLIILFG LLLSQSMVLT LTVLAFFNLF 180 FVFVYDYAYF KLFDKLSFRN SFSRNTIDES FKIIRVCFSL FIYGFLLTLV FNEAKLSISG 240 AYAKGIVEAG AQRDYNILFM PVFFMSLCIL VVRPLITQMA ELWQRKQFQV FYKMFLKILL 300 LTLSIGIVIT FLTYLIGVNV LSLIFGLDLL KYKLELTILV LSGVLYSFSI ILENILIIMR 360 KHYYLLSVYI LMFIVTKIIT TELVNKYQIM GASISFCIAM IVYATGSLTI FSIIKFRRK 419
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37746-F1-model_v4 | 4 | 419 | 4 | 415 | 0.8573 |
0.884 |
| AF-P71399-F1-model_v4 | 5 | 418 | 1 | 401 | 0.8508 |
0.8873 |
| AF-Q32EG2-F1-model_v4 | 8 | 412 | 3 | 396 | 0.8352 |
0.8806 |
| AF-P26400-F1-model_v4 | 2 | 419 | 5 | 430 | 0.8319 |
0.8638 |
| AF-P0AAA7-F1-model_v4 | 5 | 418 | 1 | 416 | 0.8201 |
0.8493 |
| AF-Q58770-F1-model_v4 | 4 | 419 | 1 | 415 | 0.8193 |
0.8456 |
| AF-Q2G1J8-F1-model_v4 | 5 | 419 | 4 | 397 | 0.8168 |
0.8697 |
| AF-Q57484-F1-model_v4 | 5 | 419 | 1 | 401 | 0.8167 |
0.8587 |
| AF-G3XD19-F1-model_v4 | 4 | 419 | 2 | 411 | 0.8162 |
0.8498 |
| AF-Q9L6Q9-F1-model_v4 | 5 | 418 | 1 | 416 | 0.8123 |
0.8421 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 2 | 418 | 2 | 437 | 0.7877 |
0.8844 |
| QNU38870.1 | GT4 | 6 | 417 | 1 | 408 | 0.7178 |
0.8778 |
| AF-A0A345VG16-F1-model_v4 | GT2 | 1 | 419 | 267 | 681 | 0.6877 |
0.8731 |
| AF-A0A248VQW5-F1-model_v4 | GT2 | 5 | 419 | 5 | 429 | 0.6822 |
0.8749 |
| B1FZW0 | GT2 | 5 | 419 | 5 | 428 | 0.6809 |
0.873 |
| AF-A0A5B8KBR4-F1-model_v4 | GT2 | 1 | 419 | 268 | 681 | 0.6801 |
0.8679 |
| AF-A0A1P8M2V1-F1-model_v4 | GT2 | 1 | 419 | 272 | 686 | 0.6786 |
0.8662 |
| A0A836MCF6 | GT100 | 5 | 419 | 1 | 402 | 0.6655 |
0.8766 |
| A0A0J6W0G8 | GH16_3 | 1 | 419 | 12 | 427 | 0.6566 |
0.8363 |
| A0A975FPH4 | GT4 | 7 | 419 | 1 | 511 | 0.6533 |
0.8656 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 2 | 418 | 2 | 437 | 0.7877 |
0.8844 |
| A0A160T2N7 | GT28 | 3 | 418 | 38 | 468 | 0.751 |
0.8659 |
| QNU38870.1 | GT4 | 6 | 417 | 1 | 408 | 0.7178 |
0.8778 |
| B1FZW0 | GT2 | 5 | 419 | 5 | 428 | 0.6809 |
0.873 |
| A0A836MCF6 | GT100 | 5 | 419 | 1 | 402 | 0.6655 |
0.8766 |
| A0A0J6W0G8 | GH16_3 | 1 | 419 | 12 | 427 | 0.6566 |
0.8363 |
| A0A975FPH4 | GT4 | 7 | 419 | 1 | 511 | 0.6533 |
0.8656 |
| A0A7G6YY69 | GT4 | 1 | 419 | 26 | 435 | 0.6515 |
0.8847 |
| A0A2W1ZQY8 | GT4 | 6 | 419 | 1 | 401 | 0.649 |
0.8991 |
| A0A2U8PPB3 | GT4 | 7 | 416 | 1 | 404 | 0.6455 |
0.8953 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fhz-assembly1.cif.gz_A | 11 | 419 | 10 | 436 | 0.8079 |
0.8649 |
| 7waw-assembly1.cif.gz_A | 12 | 419 | 1 | 429 | 0.7646 |
0.8646 |
| 5y50-assembly1.cif.gz_A | 7 | 418 | 9 | 438 | 0.7232 |
0.7835 |
| 5xjj-assembly1.cif.gz_A | 7 | 418 | 10 | 436 | 0.707 |
0.7664 |
| 4mlb-assembly1.cif.gz_C | 3 | 419 | 3 | 451 | 0.7009 |
0.7565 |
| 6hfb-assembly3.cif.gz_C | 2 | 419 | 2 | 450 | 0.6972 |
0.7508 |
| 3wbn-assembly1.cif.gz_A | 3 | 419 | 2 | 449 | 0.6943 |
0.7489 |
| 3w4t-assembly1.cif.gz_A | 3 | 419 | 3 | 445 | 0.6909 |
0.7428 |
| 6ids-assembly1.cif.gz_A | 8 | 419 | 9 | 434 | 0.6874 |
0.7426 |
| 3vvr-assembly1.cif.gz_A | 3 | 419 | 3 | 439 | 0.6839 |
0.7327 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39855-F1-model_v4 | 7 | 416 | 1 | 396 | 0.8933 |
0.9326 |
| AF-P37746-F1-model_v4 | 4 | 419 | 4 | 415 | 0.8573 |
0.884 |
| AF-Q45411-F1-model_v4 | 1 | 419 | 5 | 429 | 0.854 |
0.8876 |
| AF-P71399-F1-model_v4 | 5 | 418 | 1 | 401 | 0.8508 |
0.8873 |
| AF-P37781-F1-model_v4 | 5 | 419 | 1 | 418 | 0.8385 |
0.8652 |
| AF-Q99191-F1-model_v4 | 2 | 419 | 6 | 432 | 0.8368 |
0.8697 |
| AF-Q03583-F1-model_v4 | 8 | 412 | 3 | 396 | 0.8321 |
0.8778 |
| AF-P26400-F1-model_v4 | 2 | 419 | 5 | 430 | 0.8319 |
0.8638 |
| AF-Q05347-F1-model_v4 | 2 | 419 | 1 | 430 | 0.8298 |
0.8678 |
| AF-Q9CNC5-F1-model_v4 | 5 | 417 | 1 | 399 | 0.8273 |
0.8679 |