PROTEIN: HRGMv2_2516_4_10
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Protein File & Metadata
Source:
HRGMv2_2516_4_10.pdb
Genome ID:
Protein ID:
HRGMv2_2516_4_10
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Protein Sequence
MSMITAHSGS DGLPANSRQF LKTATRWPVD ALEIDVRWRQ DRRQLVLAHD QETEDSVLLA 60 DALAIFRRQS HLQLLNCDLK DANLAGQVMD LAQRSGLADK IILTGTISAL EQRRWPRHVW 120 RNVETLLPEV NFDQLLNDHV MFSQMLKQAK KEGCQWLNLP FQLLHPVNLA LLKDTDFHLS 180 VWTARDVATT AVLLANGAAN VTSLAAHAYC RTMEGGLSVE QAQMGH 226
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CGS2-F1-model_v4 | 1 | 220 | 1 | 245 | 0.7436 |
0.8148 |
| AF-K0EMC9-F1-model_v4 | 1 | 216 | 6 | 255 | 0.7256 |
0.8229 |
| AF-Q2FXK4-F1-model_v4 | 1 | 214 | 8 | 247 | 0.7252 |
0.8185 |
| AF-Q9CDC5-F1-model_v4 | 1 | 222 | 10 | 270 | 0.7193 |
0.8162 |
| AF-Q9HZL4-F1-model_v4 | 1 | 218 | 1 | 240 | 0.7182 |
0.7891 |
| AF-Q8ZLF5-F1-model_v4 | 1 | 219 | 6 | 246 | 0.7132 |
0.7887 |
| AF-P10908-F1-model_v4 | 1 | 220 | 4 | 247 | 0.7128 |
0.7868 |
| AF-A0A0H3GUC8-F1-model_v4 | 1 | 219 | 4 | 246 | 0.7122 |
0.7877 |
| AF-X8EX31-F1-model_v4 | 1 | 223 | 10 | 273 | 0.7096 |
0.8144 |
| AF-O07244-F1-model_v4 | 1 | 219 | 8 | 252 | 0.6908 |
0.7816 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6N4CU10 | GH16_3 | 2 | 226 | 1 | 241 | 0.7236 |
0.7715 |
| AF-A0A1A9I9N1-F1-model_v4 | GH16_3 | 1 | 226 | 30 | 450 | 0.5725 |
0.8013 |
| AF-A0A1X9ZA52-F1-model_v4 | GH16_3 | 1 | 226 | 26 | 273 | 0.5695 |
0.7947 |
| AF-A0A7U3Q3R8-F1-model_v4 | GH16_3 | 1 | 226 | 26 | 493 | 0.5695 |
0.7938 |
| AF-A0A2Z4LSS6-F1-model_v4 | GH16_3 | 1 | 226 | 30 | 279 | 0.569 |
0.8046 |
| AF-A0A7G9QEL0-F1-model_v4 | GH16_3 | 1 | 226 | 26 | 494 | 0.5676 |
0.7919 |
| AF-A0A5B7TL98-F1-model_v4 | GH16_3 | 1 | 226 | 28 | 516 | 0.5632 |
0.7966 |
| AF-A0A286ISV7-F1-model_v4 | GH16_3 | 1 | 226 | 28 | 517 | 0.5628 |
0.7962 |
| AF-F0RHI9-F1-model_v4 | GH16_3 | 1 | 225 | 27 | 464 | 0.5598 |
0.797 |
| AF-A0A6C7E7R3-F1-model_v4 | CBM2 | 1 | 221 | 99 | 349 | 0.5488 |
0.813 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6N4CU10 | GH16_3 | 2 | 226 | 1 | 241 | 0.7236 |
0.7715 |
| A0A3G3GMK0 | GH16_3 | 1 | 226 | 28 | 445 | 0.565 |
0.7882 |
| F0RHI9 | GH16_3 | 1 | 225 | 27 | 464 | 0.5598 |
0.797 |
| A0A5B8VLY1 | GH16_3 | 1 | 225 | 40 | 459 | 0.5562 |
0.7875 |
| A0A6C7E7R3 | CBM2 | 1 | 221 | 99 | 349 | 0.5488 |
0.813 |
| A0A517STL5 | GH5 | 1 | 219 | 373 | 617 | 0.5318 |
0.8111 |
| A0A165LNT9 | CBM66 | 1 | 225 | 433 | 754 | 0.5221 |
0.8204 |
| VDR30894.1 | GH15 | 1 | 221 | 1 | 816 | 0.4905 |
0.8115 |
| L0J7R9 | GH92 | 1 | 226 | 20 | 595 | 0.4512 |
0.7629 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3ks5-assembly1.cif.gz_A | 1 | 220 | 1 | 247 | 0.775 |
0.8505 |
| 3no3-assembly1.cif.gz_A | 1 | 220 | 4 | 238 | 0.7473 |
0.8077 |
| 2pz0-assembly1.cif.gz_A | 1 | 214 | 1 | 239 | 0.7356 |
0.8189 |
| 3qvq-assembly1.cif.gz_D | 1 | 216 | 7 | 247 | 0.7314 |
0.8182 |
| 2o55-assembly1.cif.gz_A | 1 | 217 | 4 | 254 | 0.7283 |
0.8228 |
| 5t9c-assembly1.cif.gz_E | 1 | 219 | 7 | 263 | 0.7213 |
0.8195 |
| 5t9b-assembly1.cif.gz_G | 1 | 219 | 7 | 259 | 0.7203 |
0.8138 |
| 5t91-assembly1.cif.gz_A | 1 | 219 | 7 | 258 | 0.7197 |
0.8122 |
| 2otd-assembly4.cif.gz_D | 1 | 219 | 5 | 245 | 0.7122 |
0.7868 |
| 4r7o-assembly5.cif.gz_E | 1 | 218 | 4 | 275 | 0.708 |
0.8237 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P54527-F1-model_v4 | 1 | 218 | 1 | 243 | 0.7383 |
0.8123 |
| AF-P9WMU2-F1-model_v4 | 1 | 219 | 10 | 271 | 0.7133 |
0.8235 |
| AF-P10908-F1-model_v4 | 1 | 220 | 4 | 247 | 0.7128 |
0.7868 |
| AF-O14169-F1-model_v4 | 1 | 226 | 30 | 285 | 0.6664 |
0.7892 |
| AF-Q08959-F1-model_v4 | 1 | 226 | 1 | 275 | 0.6587 |
0.7893 |
| AF-F4I8H8-F1-model_v4 | 1 | 221 | 71 | 321 | 0.648 |
0.7972 |
| AF-C0JB92-F1-model_v4 | 3 | 221 | 1 | 256 | 0.6303 |
0.7347 |
| AF-C0JB51-F1-model_v4 | 3 | 221 | 1 | 255 | 0.6276 |
0.7309 |
| AF-C0JAT9-F1-model_v4 | 3 | 220 | 1 | 255 | 0.6261 |
0.7304 |
| AF-Q4VDB5-F1-model_v4 | 1 | 220 | 6 | 262 | 0.626 |
0.7323 |