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PROTEIN: HRGMv2_2516_13_44

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2516_13_44.pdb
Genome ID:
HRGMv2_2516
Protein ID:
HRGMv2_2516_13_44

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Detailed structural information will appear here after analysis...

Protein Sequence 
MVTRLISADT   SEILGMKAAE   LKQSIKASEG   RVVLSENVVG   HEVGDGITTS   EVAAAFGADL 60
ILLNGLDVLN   PGIFGLYPNE   GAKVHHDGQS   IKRLQHLVGR   PIGVNLEPVD   VNADMSETRL 120
EIPEGRMSSR   KTLTEVEKLG   FNFVCLTGNP   GTGVTNAQIV   ANVKVAKEVF   SGLIIAGKMH 180
GAGVNEPVVS   LDAVKDFLDA   GADVILVPAV   GTVPGLTDEE   VRAVVKLAHA   QDALVMSTIG 240
TSQEGSGAHY   IEEVAVRNKI   NGVDIQHMGD   AAWGIQSPFE   NIYALSRAIR   GERHAIQRMA 300
RSINR 305
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A132P1I0-F1-model_v4 1 305 1 308 0.9439 0.9565
AF-A0A1C1CVS0-F1-model_v4 28 290 1 223 0.6647 0.7844
AF-P9WG73-F1-model_v4 3 294 3 232 0.6471 0.7898
AF-K0F8B5-F1-model_v4 3 294 5 234 0.6439 0.7889
AF-Q9L9J1-F1-model_v4 4 294 1 229 0.6405 0.7907
AF-Q32AG3-F1-model_v4 4 294 1 229 0.6395 0.7892
AF-P30139-F1-model_v4 4 294 1 229 0.6395 0.7885
AF-A0A0H3GLR1-F1-model_v4 4 294 1 229 0.6393 0.7876
AF-P0C8J6-F1-model_v4 11 301 1 284 0.6361 0.6802
AF-Q7CPQ7-F1-model_v4 11 301 1 284 0.6349 0.6792
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A516TMU5-F1-model_v4 GH13 2 295 2 318 0.6062 0.6628
AF-B3DVM9-F1-model_v4 GH13 25 295 10 325 0.5966 0.707
AF-U5QCX7-F1-model_v4 GH39 27 294 22 306 0.5946 0.6949
B2PYU4 GH18 26 290 11 316 0.5816 0.6975
AF-A0A0A7CPN9-F1-model_v4 GH5_31 26 294 14 339 0.5769 0.7107
AF-A0A125T254-F1-model_v4 GH20 1 295 21 371 0.5623 0.6581
AF-A0A1D9GQ94-F1-model_v4 GH84 27 299 1 289 0.5608 0.6847
AF-A0A5K1HM48-F1-model_v4 GH26 15 304 26 324 0.5592 0.6354
AF-S4Y2P6-F1-model_v4 GH5 1 301 61 406 0.5538 0.6553
AF-A0A1E1ES21-F1-model_v4 GH39 1 295 19 348 0.5532 0.6754
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1W5LFL7 GH13 25 295 10 325 0.5981 0.7089
A0A915XPW5 GH5 19 292 1 304 0.5955 0.6807
QBJ08916.1 GH39 24 294 19 345 0.5864 0.7124
B2PYU4 GH18 26 290 11 316 0.5816 0.6975
QQN45161.1 GH39 19 298 14 330 0.58 0.6754
A0A7S8IET5 GH39 22 305 42 405 0.5788 0.7179
D8PHY0 GH20 19 292 25 335 0.5758 0.7026
APR79805.1 GH113 17 297 1 308 0.5718 0.6462
A0A806ZLV7 GH39 27 295 17 332 0.5698 0.6872
A0A517SFH8 GH18 15 294 28 320 0.5694 0.6515
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1xi3-assembly1.cif.gz_B 21 294 1 202 0.6596 0.8101
5z9y-assembly2.cif.gz_B 4 291 1 216 0.6496 0.809
1lt7-assembly1.cif.gz_A 13 299 1 277 0.649 0.7306
1xm3-assembly1.cif.gz_C 3 294 1 231 0.647 0.7817
4n6e-assembly1.cif.gz_A 3 291 1 229 0.6436 0.7776
1lt7-assembly1.cif.gz_B 13 299 1 277 0.6417 0.7327
8d45-assembly1.cif.gz_D 12 301 1 295 0.6312 0.7156
6ofu-assembly1.cif.gz_D 10 301 1 256 0.6293 0.7076
1lt8-assembly1.cif.gz_B-2 13 300 1 294 0.6248 0.7123
6ofu-assembly1.cif.gz_B 10 301 1 264 0.6224 0.6916
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8X4R2-F1-model_v4 11 301 1 284 0.638 0.6816
AF-B7UFB3-F1-model_v4 11 301 1 284 0.6378 0.682
AF-B5YV43-F1-model_v4 11 301 1 284 0.6369 0.681
AF-A9N6Z8-F1-model_v4 11 301 1 284 0.6362 0.6803
AF-A8A1W1-F1-model_v4 11 301 1 284 0.6359 0.6802
AF-B7NKL0-F1-model_v4 11 302 1 286 0.6351 0.6777
AF-Q7CPQ7-F1-model_v4 11 301 1 284 0.6349 0.6792
AF-B7N0S6-F1-model_v4 11 305 1 286 0.6348 0.6773
AF-A1AG46-F1-model_v4 11 305 1 286 0.6332 0.676
AF-Q1R9X7-F1-model_v4 11 301 1 284 0.6308 0.6768
Download Full SwissProt Results