PROTEIN: HRGMv2_2516_11_63
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Protein File & Metadata
Source:
HRGMv2_2516_11_63.pdb
Genome ID:
Protein ID:
HRGMv2_2516_11_63
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Protein Sequence
MLQLTILNAQ GAIRQGKNDY DDAPKDLHNT SSDSVFLATQ ALTYADGDII RLQVDRVPGY 60 YVVQFDETLA PTLVYLTTPT WDYPIDLSQN AQDARPEAAF KTQRHYLSAR RAWPEETDTY 120 RDWALNPHDQ PQATGIFPHA HANVETRNDA TFFAQNAIDG VWASNLHGEY PYLSWGINQD 180 PHAALTVELG RPVILDRVGV VLRADFPHDS WWDTAVLTFS DGQNEVLTLR KTGEPQYFDF 240 AEHTATAVTF HDLHRADPAS PFPALTALQF FGRNA 275
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0R4IY57-F1-model_v4 | 113 | 273 | 131 | 306 | 0.4329 |
0.7681 |
| AF-A0A0R4ITS1-F1-model_v4 | 118 | 275 | 23 | 173 | 0.4228 |
0.8103 |
| AF-O35276-F1-model_v4 | 1 | 275 | 153 | 560 | 0.3468 |
0.541 |
| AF-A0A0R0LP40-F1-model_v4 | 40 | 275 | 101 | 298 | 0.3408 |
0.6251 |
| AF-Q9QWJ9-F1-model_v4 | 30 | 275 | 150 | 551 | 0.3363 |
0.5748 |
| AF-Q8IKW0-F1-model_v4 | 10 | 275 | 173 | 687 | 0.3193 |
0.5031 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B1C4D3 | GH105 | 1 | 275 | 35 | 369 | 0.5571 |
0.8914 |
| AF-A0A346DVI5-F1-model_v4 | CBM47 | 4 | 275 | 7 | 432 | 0.4526 |
0.5792 |
| A0A9E9K109 | CBM32 | 6 | 275 | 1 | 493 | 0.4445 |
0.6151 |
| AF-A0A0G8KJA2-F1-model_v4 | GH43_29 | 19 | 275 | 55 | 514 | 0.4041 |
0.5701 |
| AF-A0A061B3V4-F1-model_v4 | AA14 | 5 | 273 | 30 | 456 | 0.3928 |
0.6156 |
| AF-A0A7H8JXZ3-F1-model_v4 | GH20 | 1 | 274 | 40 | 658 | 0.3846 |
0.5489 |
| AF-F3ZWG9-F1-model_v4 | GH43_33 | 18 | 275 | 184 | 520 | 0.3774 |
0.5287 |
| AF-C7QBZ7-F1-model_v4 | CBM32 , GH30_3 | 15 | 273 | 243 | 659 | 0.3707 |
0.5562 |
| AF-A0A4P6YHP5-F1-model_v4 | GH128 | 7 | 275 | 170 | 692 | 0.3623 |
0.5483 |
| AF-A0A3G5TAB3-F1-model_v4 | CBM32 , GH59 | 6 | 274 | 683 | 983 | 0.3591 |
0.5755 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B1C4D3 | GH105 | 1 | 275 | 35 | 369 | 0.5571 |
0.8914 |
| A0A9E9K109 | CBM32 | 6 | 275 | 1 | 493 | 0.4445 |
0.6151 |
| A0A1Y0FYD6 | CBM32 | 1 | 273 | 296 | 510 | 0.4317 |
0.7053 |
| Q2LK84 | CBM47 | 115 | 273 | 132 | 306 | 0.4288 |
0.7701 |
| A0A410GHY9 | CBM47 | 118 | 275 | 161 | 313 | 0.4225 |
0.7958 |
| A0A975PG29 | CE20 | 2 | 275 | 109 | 663 | 0.42 |
0.6016 |
| A0A6B8RL96 | CBM32 , GH26 | 1 | 275 | 42 | 482 | 0.4078 |
0.5269 |
| B3E2Q6 | CBM47 | 3 | 275 | 48 | 275 | 0.3943 |
0.6223 |
| A0A061B3V4 | AA14 | 5 | 273 | 30 | 456 | 0.3928 |
0.6156 |
| A0A7G8UM30 | CBM32 | 1 | 275 | 197 | 735 | 0.3887 |
0.5715 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3cqo-assembly1.cif.gz_C | 118 | 275 | 1 | 148 | 0.4417 |
0.8328 |
| 8ivw-assembly3.cif.gz_G | 1 | 275 | 4 | 261 | 0.4414 |
0.5671 |
| 8ivx-assembly1.cif.gz_A | 1 | 275 | 5 | 259 | 0.4389 |
0.5704 |
| 4gz9-assembly1.cif.gz_A | 1 | 275 | 124 | 527 | 0.3904 |
0.5318 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O14786-F1-model_v4 | 1 | 275 | 150 | 551 | 0.3497 |
0.5446 |
| AF-O35276-F1-model_v4 | 1 | 275 | 153 | 560 | 0.3468 |
0.541 |
| AF-Q9QWJ9-F1-model_v4 | 30 | 275 | 150 | 551 | 0.3363 |
0.5748 |