PROTEIN: HRGMv2_2498_8_11
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Protein File & Metadata
Source:
HRGMv2_2498_8_11.pdb
Genome ID:
Protein ID:
HRGMv2_2498_8_11
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Protein Sequence
MSILVTSISL LFTVLVWFSM VTNVKQGIPF SDASIFEYFG YAMNRGELMY ANLFDHKGPV 60 VFLLNYLGYL IGGALGIKFL YLFCTFLFFI ASYKISRLFT GNKQTILTLA IIFIIYEYFF 120 DGGWSLEGFI LPFLAYSLYI FLKLFIQNDF SKNDIIASGA FFSIVFFTKA NMIGIWLVFC 180 IYVLIDFILK KAYRDLFSLI GLFFVGILIP TIPLCLYLLS KGIFFEMVYQ SIGINFIYTT 240 ESNNVSMYEI IRWYISQTNL LSLNLLMLFS LIPLWKKFGI KSIFYHFVFI VCLLLALISK 300 RSYGHYILVM LPILIPYISY LFHSISKKMS FQVFFVLFLG FIIVYQNDVK SIMKSMNTRY 360 LNRSEKQQHV ASYIEKNTSM DDRIYTHRQN GTIYLYSERL ASTKFFFIPA VTDDRVIIDE 420 FRKSIQENPP IYIVFDTEWD YGKRTDSFIK DYIKVNYHLE KQIDTAMIYR KGGE 474
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CZ87-F1-model_v4 | 2 | 472 | 38 | 518 | 0.7681 |
0.8248 |
| AF-Q9HY61-F1-model_v4 | 2 | 474 | 3 | 549 | 0.7123 |
0.7835 |
| AF-K0EN63-F1-model_v4 | 3 | 474 | 1 | 500 | 0.7117 |
0.7823 |
| AF-A0A0K0DXE0-F1-model_v4 | 1 | 469 | 1 | 465 | 0.7089 |
0.7562 |
| AF-K0F7B2-F1-model_v4 | 1 | 473 | 10 | 480 | 0.7032 |
0.7446 |
| AF-Q54PM5-F1-model_v4 | 1 | 469 | 9 | 524 | 0.7015 |
0.7764 |
| AF-A0A0H3GZQ8-F1-model_v4 | 2 | 473 | 3 | 551 | 0.7009 |
0.7734 |
| AF-Q32DT1-F1-model_v4 | 2 | 474 | 3 | 550 | 0.6968 |
0.7672 |
| AF-O52327-F1-model_v4 | 2 | 474 | 3 | 547 | 0.6955 |
0.7643 |
| AF-K0F580-F1-model_v4 | 18 | 473 | 1 | 461 | 0.6932 |
0.7429 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-K4R0C6-F1-model_v4 | GT83 | 1 | 473 | 19 | 476 | 0.8059 |
0.8508 |
| AF-A0A518AYL4-F1-model_v4 | GT83 | 2 | 474 | 8 | 484 | 0.7455 |
0.7823 |
| AF-A0A6N1C8W9-F1-model_v4 | GT83 | 1 | 474 | 8 | 484 | 0.7425 |
0.7867 |
| AF-A0A6I6XX39-F1-model_v4 | GT83 | 1 | 474 | 7 | 484 | 0.7422 |
0.7843 |
| AF-A0A2P1PXF2-F1-model_v4 | GT83 | 2 | 474 | 18 | 487 | 0.742 |
0.7828 |
| AF-A0A2K9M3C4-F1-model_v4 | GT83 | 1 | 474 | 8 | 484 | 0.7412 |
0.785 |
| AF-A0A0F7Y399-F1-model_v4 | GT83 | 1 | 474 | 1 | 478 | 0.7402 |
0.7814 |
| AF-A0A0U3EJ09-F1-model_v4 | GT83 | 2 | 474 | 2 | 497 | 0.7402 |
0.7833 |
| AF-A0A1L5PQB8-F1-model_v4 | GT83 | 1 | 474 | 7 | 485 | 0.7398 |
0.783 |
| AF-A0A1L7NCC2-F1-model_v4 | GT83 | 1 | 474 | 7 | 484 | 0.7397 |
0.7853 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K4R0C6 | GT83 | 1 | 473 | 19 | 476 | 0.8059 |
0.8508 |
| A0A6C2YNQ2 | GT83 | 1 | 474 | 23 | 503 | 0.7533 |
0.7957 |
| A0A518AYL4 | GT83 | 2 | 474 | 8 | 484 | 0.7455 |
0.7823 |
| A0A2P1PXF2 | GT83 | 2 | 474 | 18 | 487 | 0.742 |
0.7828 |
| A0A0U3EJ09 | GT83 | 2 | 474 | 2 | 497 | 0.7402 |
0.7833 |
| A0A1L9GN74 | GT83 | 3 | 473 | 5 | 490 | 0.7391 |
0.7823 |
| A0A127JPD6 | GT83 | 1 | 474 | 8 | 506 | 0.7366 |
0.7928 |
| BCT95651.1 | GT83 | 3 | 474 | 1 | 484 | 0.7362 |
0.7751 |
| B7J3X5 | GT83 | 3 | 474 | 6 | 456 | 0.7353 |
0.7834 |
| G2IXE2 | GT83 | 1 | 474 | 13 | 516 | 0.7352 |
0.7908 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5f15-assembly1.cif.gz_A | 3 | 473 | 3 | 535 | 0.7137 |
0.783 |
| 5ezm-assembly1.cif.gz_A | 3 | 473 | 4 | 531 | 0.7079 |
0.7743 |
| 8if8-assembly1.cif.gz_B | 1 | 473 | 12 | 619 | 0.6629 |
0.7683 |
| 8if8-assembly1.cif.gz_C | 1 | 473 | 11 | 597 | 0.6557 |
0.7492 |
| 7zlh-assembly1.cif.gz_A | 1 | 473 | 7 | 654 | 0.654 |
0.7719 |
| 7zlg-assembly1.cif.gz_A | 1 | 473 | 7 | 662 | 0.6539 |
0.7755 |
| 7zli-assembly1.cif.gz_A | 1 | 472 | 7 | 661 | 0.6535 |
0.7757 |
| 8age-assembly1.cif.gz_A | 1 | 474 | 9 | 611 | 0.6356 |
0.7452 |
| 6ftg-assembly1.cif.gz_5 | 1 | 474 | 16 | 644 | 0.6268 |
0.7351 |
| 8b6l-assembly1.cif.gz_I | 1 | 474 | 7 | 678 | 0.6251 |
0.7499 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MJ97-F1-model_v4 | 1 | 474 | 1 | 494 | 0.7269 |
0.7631 |
| AF-Q1MJ94-F1-model_v4 | 2 | 473 | 6 | 494 | 0.7208 |
0.762 |
| AF-Q3KCB9-F1-model_v4 | 2 | 474 | 3 | 549 | 0.7177 |
0.7892 |
| AF-Q1MLH5-F1-model_v4 | 2 | 474 | 3 | 470 | 0.7164 |
0.7477 |
| AF-Q4KC80-F1-model_v4 | 2 | 474 | 3 | 548 | 0.715 |
0.7867 |
| AF-Q02R27-F1-model_v4 | 2 | 474 | 3 | 549 | 0.7146 |
0.786 |
| AF-Q1MJ96-F1-model_v4 | 2 | 474 | 6 | 499 | 0.7132 |
0.7549 |
| AF-A6V1N8-F1-model_v4 | 2 | 474 | 3 | 549 | 0.7131 |
0.7843 |
| AF-B7VBN0-F1-model_v4 | 2 | 474 | 3 | 549 | 0.7125 |
0.7836 |
| AF-Q9HY61-F1-model_v4 | 2 | 474 | 3 | 549 | 0.7123 |
0.7835 |