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PROTEIN: HRGMv2_2488_8_27

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Protein File & Metadata
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Source:
HRGMv2_2488_8_27.pdb
Genome ID:
HRGMv2_2488
Protein ID:
HRGMv2_2488_8_27

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Detailed structural information will appear here after analysis...

Protein Sequence 
MARRIISATN   SDIKKFTSKD   LKESIIASEG   RTILSQNFVG   FEPLVEGTIN   PEVANAAGAD 60
MVFLNGYSMD   KDSNLPGLKY   STNDGVVKNL   RVNDVKKLLH   MPVGAYLECG   VGDDASATSG 120
NPSIQMVRKD   RVASDENLKK   VLDEKIDFVV   LGGNPGTGTS   LDTIINATKR   AKKILKDKVM 180
IWAGKWEDGS   KEKVLGDPTR   EDSKEKIDEL   IDAGADVICL   PMPGSRQGIT   TDSIRDLVTH 240
VHMYNDKHTL   AMCFLDGSVE   GSDIDTVRAC   ALMSKQTGAD   IHAIGDAGLH   GISQPEDIYQ 300
MCLTIKGRRL   TWLKMAAGHR 320
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A132P1I0-F1-model_v4 1 320 1 308 0.9001 0.9289
AF-Q5F6P1-F1-model_v4 31 307 1 237 0.6358 0.7547
AF-P32141-F1-model_v4 16 310 2 289 0.6194 0.6789
AF-A0A077ZJI0-F1-model_v4 16 310 2 289 0.6192 0.6787
AF-A0A132Z6Z1-F1-model_v4 11 318 1 289 0.6181 0.6699
AF-K0EXX6-F1-model_v4 13 320 16 327 0.6154 0.6676
AF-Q7CQ97-F1-model_v4 3 308 32 345 0.603 0.6769
AF-K0EM95-F1-model_v4 4 311 4 363 0.5648 0.6579
AF-A0A158Q5K4-F1-model_v4 13 310 10 348 0.56 0.6778
AF-A0A0N4URH1-F1-model_v4 18 310 20 308 0.5368 0.6685
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0G3F1D5-F1-model_v4 GH39 23 310 17 336 0.618 0.7191
AF-Q6UAY5-F1-model_v4 GH27 24 311 1 257 0.5909 0.7093
A0A9Q5QKS4 GH0 19 310 26 328 0.5837 0.6701
AF-C6TFG7-F1-model_v4 GH27 17 310 47 311 0.5798 0.7046
AF-A0A1P8BFT2-F1-model_v4 GH27 17 310 47 313 0.5772 0.7026
A0A2P0VP48 GH27 23 310 1 271 0.5499 0.6914
AF-M1MH21-F1-model_v4 GH5_7 7 313 51 407 0.5479 0.6906
AF-A0A0G9HBZ7-F1-model_v4 GH27 11 309 27 307 0.5458 0.6977
AF-A0A7G8Q377-F1-model_v4 GH27 10 310 26 308 0.5446 0.6918
AF-A0A5C1IAF6-F1-model_v4 GH27 19 310 5 281 0.5441 0.6853
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1C3SZV1 GH39 7 308 26 341 0.6047 0.6811
A0A0T7GW03 GH5_5 19 314 28 348 0.5862 0.6787
A0A975HA67 GH113 22 311 1 311 0.5723 0.6432
BDS48821.1 GH27 17 310 1 285 0.5549 0.6809
A0A2P0VP48 GH27 23 310 1 271 0.5499 0.6914
A0A7H9MY52 GH113 23 311 26 422 0.5378 0.6844
A0A7G5H0J5 GH10 4 320 42 431 0.5369 0.6457
UAY56479.1 GH27 19 309 21 294 0.5367 0.6929
A0A9Y2J0F3 GH27 18 310 41 320 0.534 0.6886
A0A412ZLA7 GH27 17 309 21 293 0.5308 0.6916
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4n6e-assembly1.cif.gz_A 3 307 1 229 0.6409 0.7887
1to3-assembly1.cif.gz_A-2 16 310 1 289 0.6204 0.6772
7ag1-assembly1.cif.gz_Z 16 310 1 288 0.6152 0.6794
5u14-assembly1.cif.gz_A 1 310 1 262 0.614 0.708
2cdh-assembly1.cif.gz_0 4 308 1 220 0.6139 0.7564
3n9s-assembly1.cif.gz_B 10 314 1 295 0.6136 0.6598
3tzf-assembly1.cif.gz_B 1 310 1 269 0.6115 0.6906
1qns-assembly1.cif.gz_A 12 310 1 344 0.6115 0.6977
5u10-assembly1.cif.gz_A 1 310 1 264 0.6114 0.7024
7ncc-assembly1.cif.gz_B 11 318 1 284 0.603 0.6616
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8TUZ9-F1-model_v4 29 306 1 237 0.6571 0.7708
AF-Q3V7J9-F1-model_v4 31 307 1 233 0.643 0.7685
AF-Q7NWC0-F1-model_v4 29 307 1 238 0.639 0.7556
AF-C1D7L7-F1-model_v4 29 307 1 238 0.6362 0.7554
AF-Q47QR3-F1-model_v4 15 307 1 267 0.6325 0.7135
AF-Q3KK58-F1-model_v4 2 310 1 269 0.6298 0.7062
AF-Q4KKP5-F1-model_v4 2 310 1 269 0.6289 0.7051
AF-Q8Z2T5-F1-model_v4 17 310 2 289 0.6197 0.6793
AF-P32141-F1-model_v4 16 310 2 289 0.6194 0.6789
AF-Q8X8D5-F1-model_v4 16 310 2 289 0.6194 0.6789
Download Full SwissProt Results