dbCAN Logo

PROTEIN: HRGMv2_2484_6_106

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_2484_6_106.pdb
Genome ID:
HRGMv2_2484
Protein ID:
HRGMv2_2484_6_106

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MIKTRKELKE   FLDLERRLYI   KGGYLRELKL   RFLHDSDYLI   WSFIKSLRYT   EYHFNKKNRL 60
RYIIHQRRKN   IKGRRLGISI   YHNSIDKGLK   IHHYGNIIVN   KNAKIGKNCE   LHGDNCIGNK 120
GDFDRFNAPI   IGDNLDLGIG   AVVIGGIKLG   SCITVGANAV   VVKDCLTDSS   TLVGVPAKCY 180
YKLAD 185
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q0PAC7-F1-model_v4 6 185 1 177 0.7273 0.8324
AF-Q7AQF4-F1-model_v4 8 185 1 173 0.6986 0.8399
AF-P95231-F1-model_v4 8 185 1 173 0.697 0.841
AF-X8FD92-F1-model_v4 8 185 1 174 0.6966 0.8345
AF-Q9HXI6-F1-model_v4 8 185 1 173 0.6642 0.8408
AF-Q5F6X0-F1-model_v4 2 184 75 252 0.6575 0.8278
AF-I1KHY6-F1-model_v4 1 185 8 265 0.651 0.8065
AF-Q8W0E4-F1-model_v4 1 185 27 281 0.6438 0.8141
AF-B4FRV1-F1-model_v4 1 185 32 287 0.6412 0.8174
AF-Q10QH1-F1-model_v4 1 185 10 297 0.633 0.8116
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1C5YN28 GT2 1 182 332 516 0.6235 0.9405
AF-A0A6M5IZ97-F1-model_v4 GT2 1 184 291 467 0.5951 0.9107
AF-K9T6P7-F1-model_v4 GT2 1 185 328 502 0.5605 0.8753
AF-A0A250IFU7-F1-model_v4 GT2 3 184 353 529 0.5372 0.8413
AF-A0A250IU01-F1-model_v4 GT2 3 185 353 533 0.5353 0.8216
AF-A0A0K1Q0U6-F1-model_v4 GT2 1 176 350 538 0.4983 0.7976
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1C5YN28 GT2 1 182 332 516 0.6235 0.9405
A0A6M5IZ97 GT2 1 184 291 467 0.5951 0.9107
K9T6P7 GT2 1 185 328 502 0.5605 0.8753
A0A250IU01 GT2 3 185 353 533 0.5353 0.8216
A0A0K1Q0U6 GT2 1 176 350 538 0.4983 0.7976
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4hzc-assembly2.cif.gz_I 2 184 66 242 0.6883 0.8337
4n6a-assembly2.cif.gz_B 2 180 71 242 0.6863 0.8499
4n69-assembly1.cif.gz_A 2 180 70 243 0.6844 0.8407
4n6b-assembly1.cif.gz_D 2 180 66 232 0.6828 0.8542
4n6b-assembly1.cif.gz_A 2 180 66 233 0.6827 0.8512
4hzc-assembly2.cif.gz_G 2 184 66 240 0.6811 0.8317
4hzd-assembly1.cif.gz_A 2 184 71 248 0.681 0.8297
4hzc-assembly1.cif.gz_E 2 184 66 241 0.68 0.8278
4n6b-assembly2.cif.gz_B 4 180 69 236 0.6797 0.8524
4n6b-assembly2.cif.gz_C 2 180 68 233 0.6754 0.8507
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5HRM4-F1-model_v4 8 185 1 173 0.7195 0.8428
AF-Q8CTU2-F1-model_v4 8 184 1 173 0.7157 0.838
AF-P95231-F1-model_v4 8 185 1 173 0.697 0.841
AF-Q56002-F1-model_v4 8 185 1 173 0.6902 0.8536
AF-P32003-F1-model_v4 2 185 71 250 0.6801 0.833
AF-P57162-F1-model_v4 4 185 73 251 0.6641 0.8333
AF-Q8W0E4-F1-model_v4 1 185 27 281 0.6438 0.8141
AF-Q10QH1-F1-model_v4 1 185 10 297 0.633 0.8116
AF-Q42588-F1-model_v4 2 185 110 293 0.6266 0.8065
AF-Q0DGG8-F1-model_v4 2 185 135 316 0.615 0.8215
Download Full SwissProt Results