PROTEIN: HRGMv2_2483_2_240
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Protein File & Metadata
Source:
HRGMv2_2483_2_240.pdb
Genome ID:
Protein ID:
HRGMv2_2483_2_240
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Protein Sequence
MTLKIDKLFF ICLSFMGIVL GSSQAIVNLG LDNVVKYVSY FILISCILLK LIVNRKNIVV 60 GRIFYFILIS FLFTIGICLQ DLPISKRIYL SFSMLIISSL ATLPITLFST VKEFRRIAYY 120 LLYAVLLSTF LGLVFRVQML TIAVEGVGSS FGFNGGMLHK NFYAITVLSS YILLFISRKY 180 GVKHDIDNYV LWFELFLIFI SNSRTVYLIL IVFYCINNWK LLLRINKKQR FLLIFVAVAT 240 LLSLVIIFFE YITTNSGSYS VRVQGIINFF NYYHSDYFHL FFGDAKLAFG DSTHDYGYNI 300 RSVTGWNGTV EMPLLSVMIK NGYVGLIGYA IIIASFITSI KRIKNIDLKT IGLLILIPLL 360 MSATVENYIV NISFVFMPVC FCTLNSLKNL KLIESK 396
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 1 | 390 | 13 | 387 | 0.645 |
0.705 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A212QE91-F1-model_v4 | GT2 | 1 | 394 | 1 | 408 | 0.5562 |
0.71 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 1 | 394 | 1 | 408 | 0.5545 |
0.7075 |
| AF-E4PMS8-F1-model_v4 | GT2 | 1 | 394 | 1 | 408 | 0.5545 |
0.7074 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 1 | 391 | 17 | 443 | 0.5529 |
0.7382 |
| K2DNF3 | GT83 | 3 | 392 | 18 | 444 | 0.5299 |
0.7633 |
| AF-A0A0C5WHY3-F1-model_v4 | GT4 | 2 | 391 | 3 | 397 | 0.5193 |
0.6966 |
| AF-D5MJ04-F1-model_v4 | GT9 | 1 | 392 | 20 | 414 | 0.5192 |
0.6984 |
| B7AUF6 | GT4 | 1 | 396 | 10 | 387 | 0.517 |
0.7294 |
| AF-A0A160T1R3-F1-model_v4 | GH39 | 1 | 396 | 579 | 1046 | 0.5145 |
0.7506 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 1 | 391 | 17 | 443 | 0.5529 |
0.7382 |
| K2DNF3 | GT83 | 3 | 392 | 18 | 444 | 0.5299 |
0.7633 |
| A0A0C5WHY3 | GT4 | 2 | 391 | 3 | 397 | 0.5193 |
0.6966 |
| D5MJ04 | GT9 | 1 | 392 | 20 | 414 | 0.5192 |
0.6984 |
| B7AUF6 | GT4 | 1 | 396 | 10 | 387 | 0.517 |
0.7294 |
| A0A5B7R2V6 | GH5_39 | 1 | 396 | 380 | 793 | 0.5169 |
0.6993 |
| A0A160T1R3 | GH39 | 1 | 396 | 579 | 1046 | 0.5145 |
0.7506 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q02729-F1-model_v4 | 1 | 391 | 1 | 403 | 0.73 |
0.7931 |
| AF-Q9HUG6-F1-model_v4 | 1 | 390 | 13 | 387 | 0.645 |
0.705 |