PROTEIN: HRGMv2_2474_1_128
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Protein File & Metadata
Source:
HRGMv2_2474_1_128.pdb
Genome ID:
Protein ID:
HRGMv2_2474_1_128
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Protein Sequence
MLNLFENYRE EEKDLENSLK QAGYEQQTIV LNEDGYLPEH VTSPISFFTG MKEENSSKDE 60 SPKFFNEISL PNYWEIKGDG QKAEIFEGYK KRGHINYSQR KTDYRAVKSV EWLNDSGRVR 120 AIDLYNQYGR LFGRETYSDG QRTLTTYFDK KQAEVILLNH VTQTIQLNYK KKQYVFETYT 180 DFIIFYLEES ESNTREIFYN SLGRPFFITE ALKTKKPNKA YNHTLFWQEE SAEIPGNMRM 240 ILSDKAAPTK RIVVQNREEY MRIQQQIDKP TSVQIEYLGY LYNLRARKSI NKSILILTNS 300 DQIAQLNQLV EALPNYQFNI AARTTMSQKL HAFENYSNVQ LYPTVDDSEL EKLISESSFY 360 LDINHGNEVE HIIRTAFENN QLILGFKETI HNQRYTSLEN IFLQNDWMNL VQRIREVGKN 420 FKEYRKALGS QWWSSGQSTI DDYKEVLK 448
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FUW8-F1-model_v4 | 1 | 448 | 1 | 447 | 0.8834 |
0.9052 |
| AF-Q2FUW3-F1-model_v4 | 1 | 448 | 2 | 511 | 0.6214 |
0.6837 |
| AF-Q2G0L2-F1-model_v4 | 1 | 448 | 1 | 494 | 0.61 |
0.6634 |
| AF-Q2G0L3-F1-model_v4 | 1 | 448 | 1 | 490 | 0.6004 |
0.6499 |
| AF-Q2FUW7-F1-model_v4 | 1 | 448 | 1 | 498 | 0.5791 |
0.6364 |
| AF-O05083-F1-model_v4 | 1 | 448 | 3 | 351 | 0.5477 |
0.6373 |
| AF-Q5F734-F1-model_v4 | 1 | 448 | 6 | 352 | 0.5394 |
0.6309 |
| AF-Q8CWU0-F1-model_v4 | 1 | 448 | 4 | 381 | 0.5345 |
0.6036 |
| AF-Q0P9C5-F1-model_v4 | 1 | 448 | 3 | 351 | 0.5308 |
0.6221 |
| AF-A0A2K6WNG9-F1-model_v4 | 1 | 448 | 3 | 398 | 0.5196 |
0.5787 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A252CEU4 | GT8 | 1 | 448 | 1 | 448 | 0.9958 |
0.9987 |
| AF-A0A6G8AZZ1-F1-model_v4 | GT8 | 1 | 448 | 1 | 448 | 0.9646 |
0.9725 |
| AF-A0A1V0GGE3-F1-model_v4 | GT8 | 1 | 448 | 1 | 439 | 0.9529 |
0.9699 |
| AF-A0A412A7S3-F1-model_v4 | GT8 | 1 | 448 | 1 | 439 | 0.9529 |
0.9699 |
| AF-F2I915-F1-model_v4 | GT8 | 1 | 448 | 1 | 444 | 0.9521 |
0.9631 |
| AF-A0A1V0H6J8-F1-model_v4 | GT8 | 1 | 448 | 1 | 439 | 0.9511 |
0.9683 |
| AF-A0A0A1DT88-F1-model_v4 | GT8 | 1 | 448 | 1 | 439 | 0.9511 |
0.9683 |
| AF-A0A2X3YJ50-F1-model_v4 | GT8 | 1 | 448 | 1 | 439 | 0.9505 |
0.9678 |
| AF-A0A7U7CB17-F1-model_v4 | GT8 | 1 | 448 | 1 | 439 | 0.9502 |
0.9675 |
| AF-F8LVG2-F1-model_v4 | GT8 | 1 | 448 | 1 | 439 | 0.9501 |
0.9675 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A252CEU4 | GT8 | 1 | 448 | 1 | 448 | 0.9958 |
0.9987 |
| F2I915 | GT8 | 1 | 448 | 1 | 444 | 0.9521 |
0.9631 |
| T2F526 | GT8 | 1 | 448 | 1 | 443 | 0.9474 |
0.9644 |
| QUE54659.1 | GT8 | 1 | 448 | 1 | 440 | 0.9456 |
0.9663 |
| J3AIZ9 | GT8 | 1 | 448 | 1 | 439 | 0.9408 |
0.9613 |
| A0A7H9E6L8 | GT8 | 1 | 448 | 1 | 438 | 0.9394 |
0.9699 |
| A0A8E2VFN6 | GT8 | 1 | 448 | 1 | 439 | 0.9385 |
0.9575 |
| A0A428GIL4 | GT8 | 1 | 447 | 1 | 442 | 0.9361 |
0.9525 |
| A0A7T7NYN3 | GT8 | 1 | 448 | 1 | 440 | 0.9357 |
0.9549 |
| A0A7D7G947 | GT8 | 1 | 448 | 1 | 437 | 0.9357 |
0.9568 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5e9u-assembly2.cif.gz_H | 1 | 448 | 1 | 442 | 0.9261 |
0.9462 |
| 6oyc-assembly4.cif.gz_A | 1 | 448 | 2 | 496 | 0.6944 |
0.7516 |
| 6lnw-assembly1.cif.gz_A | 1 | 448 | 1 | 486 | 0.6808 |
0.7367 |
| 5vae-assembly5.cif.gz_G | 1 | 448 | 1 | 504 | 0.679 |
0.7435 |
| 5vae-assembly5.cif.gz_E | 1 | 448 | 1 | 504 | 0.6776 |
0.7422 |
| 5vae-assembly1.cif.gz_A | 1 | 448 | 2 | 505 | 0.6737 |
0.7423 |
| 7ec7-assembly1.cif.gz_A | 1 | 448 | 1 | 494 | 0.6312 |
0.686 |
| 7ec7-assembly2.cif.gz_B | 1 | 448 | 1 | 492 | 0.6218 |
0.6753 |
| 5vaf-assembly1.cif.gz_A | 1 | 448 | 2 | 504 | 0.5967 |
0.6559 |
| 4pqg-assembly1.cif.gz_A | 1 | 448 | 5 | 502 | 0.5955 |
0.6541 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0S4NND9-F1-model_v4 | 1 | 448 | 1 | 437 | 0.9402 |
0.9637 |
| AF-Q3S2Y1-F1-model_v4 | 1 | 448 | 1 | 438 | 0.9261 |
0.9509 |
| AF-A1C3M0-F1-model_v4 | 1 | 448 | 1 | 435 | 0.9187 |
0.9472 |
| AF-Q79T00-F1-model_v4 | 1 | 448 | 1 | 442 | 0.9045 |
0.9314 |
| AF-A0A0H2UR90-F1-model_v4 | 1 | 448 | 1 | 440 | 0.8995 |
0.9272 |
| AF-Q9AET9-F1-model_v4 | 1 | 448 | 1 | 517 | 0.6693 |
0.7412 |
| AF-Q2FUW3-F1-model_v4 | 1 | 448 | 2 | 511 | 0.6214 |
0.6837 |
| AF-A0A0H2WWV6-F1-model_v4 | 1 | 448 | 3 | 489 | 0.5954 |
0.6453 |
| AF-Q3S2Y2-F1-model_v4 | 1 | 448 | 1 | 499 | 0.5913 |
0.6493 |
| AF-A0A0H2URG7-F1-model_v4 | 1 | 448 | 1 | 499 | 0.5846 |
0.643 |