PROTEIN: HRGMv2_2460_14_29
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Protein File & Metadata
Source:
HRGMv2_2460_14_29.pdb
Genome ID:
Protein ID:
HRGMv2_2460_14_29
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Protein Sequence
MLIIAQEPSH ATEKLRRLLD SFGIQYRVFY TNFETDVDKA TISLASSFSY SSDEDYQGKP 60 LFFNDLSVPL YWELWTLGIT TYIFDGQDRR ASIILRENLK DRTVKQVHWF GQGEKVIAID 120 DYNRYGWRTK QRLLDDEEHA LIDIYFNRNQ EEVLLHYIQE GYLIDQGSEG RDRVFSGKEE 180 LTKAVLNQIV KPDEVIICMD ATLLPMLQVQ QPNRLVYCSA SHDGLEHIQN QVSHTLIANY 240 YPQEERRSGL IYLAGAEQEG AKTFTPQAMV MTASENIEGL AGLVDAFPNF DFHIAAQTSM 300 GPKLICLEGK VNVHLYPGIS QEQYQELLRK SSIYLDLNYG SEVSDVTLDA IENEHLLYGL 360 ESTVHRPYYK TLPTVYASYE ELEQGFRQLL QQADFYPNAL ESQKEILKLA ERGEILAFLT 420 RLEGEKDDDL HL 432
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FUW8-F1-model_v4 | 1 | 424 | 1 | 451 | 0.678 |
0.7296 |
| AF-Q2G0L3-F1-model_v4 | 1 | 424 | 2 | 490 | 0.6577 |
0.7315 |
| AF-Q2FUW3-F1-model_v4 | 1 | 431 | 2 | 517 | 0.6576 |
0.7385 |
| AF-Q2G0L2-F1-model_v4 | 1 | 427 | 2 | 496 | 0.6491 |
0.7229 |
| AF-Q2FUW7-F1-model_v4 | 1 | 427 | 2 | 502 | 0.6254 |
0.7002 |
| AF-O05083-F1-model_v4 | 1 | 423 | 4 | 353 | 0.5303 |
0.6077 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S1DKP0 | GT8 | 1 | 432 | 1 | 432 | 0.9682 |
0.9757 |
| AF-A0A1V0GEF3-F1-model_v4 | GT8 | 1 | 432 | 1 | 432 | 0.9586 |
0.9676 |
| AF-A0A1V0H8S9-F1-model_v4 | GT8 | 1 | 432 | 1 | 432 | 0.9585 |
0.9675 |
| A0A1X1KKR5 | GT8 | 1 | 428 | 1 | 427 | 0.9142 |
0.9341 |
| AF-A0A7D4F6T2-F1-model_v4 | GT8 | 1 | 432 | 1 | 432 | 0.9128 |
0.9281 |
| AF-A0A7L6WMT6-F1-model_v4 | GT8 | 1 | 432 | 1 | 432 | 0.9054 |
0.921 |
| A0A9X0WP12 | GT8 | 1 | 432 | 1 | 432 | 0.8936 |
0.9118 |
| AF-A0A448AE70-F1-model_v4 | GT8 | 1 | 432 | 1 | 432 | 0.8909 |
0.9083 |
| AF-A0A5J6LNV6-F1-model_v4 | GT8 | 1 | 427 | 1 | 427 | 0.8661 |
0.8914 |
| AF-A0A7G9T5H4-F1-model_v4 | GT8 | 1 | 427 | 2 | 449 | 0.7938 |
0.8402 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S1DKP0 | GT8 | 1 | 432 | 1 | 432 | 0.9682 |
0.9757 |
| A0A1X1KKR5 | GT8 | 1 | 428 | 1 | 427 | 0.9142 |
0.9341 |
| A0A9X0WP12 | GT8 | 1 | 432 | 1 | 432 | 0.8936 |
0.9118 |
| A0A7G9T5H4 | GT8 | 1 | 427 | 2 | 449 | 0.7938 |
0.8402 |
| A0A372KJZ7 | GT8 | 1 | 424 | 1 | 438 | 0.7572 |
0.8026 |
| A1C3M0 | GT8 | 1 | 426 | 1 | 439 | 0.7514 |
0.7942 |
| S5QZV0 | GT8 | 1 | 426 | 1 | 442 | 0.7441 |
0.7894 |
| QUE54659.1 | GT8 | 1 | 424 | 1 | 442 | 0.7401 |
0.7899 |
| A0A0D4CK58 | GT8 | 1 | 426 | 1 | 447 | 0.7316 |
0.7797 |
| A0A7T2RSN3 | GT8 | 1 | 424 | 1 | 440 | 0.7303 |
0.7754 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6lnw-assembly1.cif.gz_A | 1 | 427 | 2 | 492 | 0.7238 |
0.7998 |
| 6oyc-assembly4.cif.gz_A | 1 | 424 | 2 | 498 | 0.7166 |
0.8001 |
| 5e9u-assembly2.cif.gz_H | 1 | 424 | 1 | 445 | 0.7142 |
0.7661 |
| 5vae-assembly5.cif.gz_E | 1 | 430 | 2 | 508 | 0.7121 |
0.7923 |
| 5vae-assembly5.cif.gz_G | 1 | 427 | 2 | 510 | 0.7097 |
0.7944 |
| 5vae-assembly1.cif.gz_A | 1 | 427 | 2 | 511 | 0.7069 |
0.795 |
| 7ec7-assembly1.cif.gz_A | 1 | 426 | 2 | 496 | 0.6701 |
0.7462 |
| 7ec7-assembly2.cif.gz_B | 1 | 426 | 2 | 494 | 0.6636 |
0.7371 |
| 4pqg-assembly1.cif.gz_A | 1 | 428 | 6 | 505 | 0.6547 |
0.7309 |
| 5vaf-assembly1.cif.gz_A | 1 | 430 | 2 | 508 | 0.6503 |
0.7274 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A1C3M0-F1-model_v4 | 1 | 426 | 1 | 439 | 0.7517 |
0.7946 |
| AF-Q3S2Y1-F1-model_v4 | 1 | 425 | 1 | 442 | 0.7375 |
0.7854 |
| AF-A0A0S4NND9-F1-model_v4 | 1 | 426 | 1 | 441 | 0.7374 |
0.7803 |
| AF-Q9AET9-F1-model_v4 | 1 | 424 | 2 | 520 | 0.7045 |
0.8033 |
| AF-A0A0H2UR90-F1-model_v4 | 1 | 425 | 1 | 445 | 0.6947 |
0.7408 |
| AF-Q79T00-F1-model_v4 | 1 | 427 | 1 | 449 | 0.6893 |
0.7361 |
| AF-Q2FUW3-F1-model_v4 | 1 | 431 | 2 | 517 | 0.6576 |
0.7385 |
| AF-Q3S2Y2-F1-model_v4 | 1 | 427 | 3 | 505 | 0.6394 |
0.7165 |
| AF-Q9AET5-F1-model_v4 | 1 | 427 | 3 | 505 | 0.6381 |
0.7158 |
| AF-A0A0H2URG7-F1-model_v4 | 1 | 427 | 3 | 503 | 0.6348 |
0.7107 |