PROTEIN: HRGMv2_2456_3_13
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Protein File & Metadata
Source:
HRGMv2_2456_3_13.pdb
Genome ID:
Protein ID:
HRGMv2_2456_3_13
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Protein Sequence
MKQIFKLREK LWFSLIIIAF AVLLVTPQLF TRKVILGSDS IFHYNRFYEA AMQLKNGNLS 60 YFLSLYGFQQ SGRIVNALYG PFFAYLQGGL ILISGTWFRY QIVSRVLLHI LAESSMYALL 120 KQCKVKTTIS LSLGLLYATT FSIQYWTMRQ GFSSWGAALL PFCFIPAIHY VFYQKVEPIR 180 LALSMALIFQ VHVLSALILV MMYLPFYLYT FVKSPIAKKK ETFVQVLIAV ILFLLLTVNV 240 WLVLLYLRGT NHLLDPFINR EIGKNGIDGT ARYWLYTPIS LMVLLILQFL YAVLNWKKFA 300 RWKKILHFIY FVFFFLSTGL FPWQYLVENG NTFAELIQFP FRFFVPATIL LLAITGLTVT 360 RFVNWRKSIA VLLFAFAGVG LIQNMMDTTD RVKTAAQDGE LISIVKHTYV EGDYQTISLT 420 MNDSDLSQFL NLVVKPTPDY VPIYGTIGKQ NTYDLYYENI VTNQKAEKLL EDGYLVLTWQ 480 AAEGEKQNLP IVVYKDSILT LNGKELDKDD YSLSTIGTPT VSSQEGQNKL VLSYKEPGWL 540 FVALLIPIIV LGVIGLQWLY TKISIKKVA 569
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8IUA0-F1-model_v4 | 1 | 569 | 5 | 566 | 0.9491 |
0.9651 |
| AF-A0A133CH43-F1-model_v4 | 1 | 564 | 1 | 544 | 0.8212 |
0.8551 |
| AF-A0A5P3FT45-F1-model_v4 | 1 | 569 | 1 | 540 | 0.8158 |
0.8534 |
| AF-A0A133CFT8-F1-model_v4 | 4 | 566 | 1 | 536 | 0.8069 |
0.8534 |
| AF-A0A133CH37-F1-model_v4 | 103 | 569 | 1 | 452 | 0.7262 |
0.8359 |
| AF-K0EVD5-F1-model_v4 | 1 | 569 | 3 | 727 | 0.6249 |
0.7207 |
| AF-K0EMA3-F1-model_v4 | 1 | 569 | 34 | 760 | 0.6248 |
0.7266 |
| AF-K0EUF9-F1-model_v4 | 6 | 568 | 1 | 722 | 0.6226 |
0.7216 |
| AF-K0EV20-F1-model_v4 | 17 | 569 | 1 | 706 | 0.6143 |
0.7168 |
| AF-Q2FZ40-F1-model_v4 | 1 | 564 | 3 | 867 | 0.6041 |
0.7422 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160SZH0-F1-model_v4 | GT2 | 2 | 569 | 2 | 600 | 0.6459 |
0.7583 |
| AF-F2LXI8-F1-model_v4 | GT83 | 5 | 528 | 6 | 428 | 0.6246 |
0.7338 |
| A0A8D4UV30 | GT83 | 5 | 466 | 3 | 442 | 0.6182 |
0.7482 |
| AF-A0A5S9F4H0-F1-model_v4 | GT83 | 5 | 479 | 1 | 448 | 0.6107 |
0.723 |
| AF-A0A1S6H5E4-F1-model_v4 | GT39 | 2 | 398 | 1 | 402 | 0.6102 |
0.7432 |
| AF-A0A060HYH8-F1-model_v4 | GT83 | 1 | 528 | 1 | 495 | 0.607 |
0.666 |
| AF-F8E835-F1-model_v4 | GT83 | 2 | 480 | 1 | 495 | 0.6068 |
0.7086 |
| AF-A0A1W6PPW7-F1-model_v4 | GT83 | 2 | 528 | 2 | 495 | 0.6044 |
0.6645 |
| AF-A0A7U4L531-F1-model_v4 | GT83 | 1 | 528 | 1 | 495 | 0.6039 |
0.6627 |
| A0A974YQD1 | GT83 | 5 | 528 | 4 | 501 | 0.6035 |
0.6618 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160SZH0 | GT2 | 2 | 569 | 2 | 600 | 0.6459 |
0.7583 |
| A0A1B3X237 | GT83 | 5 | 465 | 1 | 437 | 0.6271 |
0.7595 |
| F2LXI8 | GT83 | 5 | 528 | 6 | 428 | 0.6246 |
0.7338 |
| A0A518B1V8 | GT83 | 1 | 533 | 9 | 494 | 0.6236 |
0.6934 |
| A0A2I1TER0 | GT83 | 5 | 479 | 5 | 448 | 0.6215 |
0.7414 |
| A0A0K1PEQ4 | GT83 | 2 | 479 | 2 | 438 | 0.6211 |
0.754 |
| A0A8D4UV30 | GT83 | 5 | 466 | 3 | 442 | 0.6182 |
0.7482 |
| A0A8J2V5Q9 | GT83 | 1 | 535 | 7 | 518 | 0.618 |
0.6703 |
| C9LV70 | GT83 | 5 | 464 | 1 | 444 | 0.6153 |
0.7398 |
| I4BYW5 | GT83 | 2 | 479 | 2 | 450 | 0.6124 |
0.729 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42377-F1-model_v4 | 1 | 569 | 9 | 614 | 0.7529 |
0.7974 |
| AF-Q1MLH5-F1-model_v4 | 9 | 520 | 2 | 473 | 0.5989 |
0.6705 |
| AF-Q1MJ96-F1-model_v4 | 8 | 529 | 7 | 499 | 0.5951 |
0.6571 |
| AF-P39007-F1-model_v4 | 1 | 464 | 7 | 568 | 0.525 |
0.7115 |
| AF-P96419-F1-model_v4 | 5 | 565 | 2 | 1282 | 0.5024 |
0.7231 |