PROTEIN: HRGMv2_2446_16_33
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Protein File & Metadata
Source:
HRGMv2_2446_16_33.pdb
Genome ID:
Protein ID:
HRGMv2_2446_16_33
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Detailed structural information will appear here after analysis...
Protein Sequence
MHLLGIIFRL FFFFCSCMGY WEFFRRKTKA NIYFLPVLTV AVQASVLFAA GLLNILMEIS 60 LLLALTGIVA LICFIVNDRG ISWLKHYRKT GYVYFGFMLI VILLSVNGKV VSHYDNFSHW 120 ALVVRQMLLT DRFPNFQDNI IVYQEYPLGS AAFIYYVAKI VGQAESVWMF AQSYMITACI 180 LPVFMYCRKN RVLSVVFMCL TTNFIFIYVI KITDLLVDTL LPLAAMSMLL FTYYAGKNKG 240 TRTELYLTIP FSIWILQIKN AGIFFCVIAT LWILSRIKSR KGRLRKGEAV KTALTALVPY 300 VTLFLWQKHC DYVFLKADTS THAMTAENYV TELSEKSLND IWSICSSWIK FCLTYKEVWL 360 VFFCLAVAGV VYYFICRNYR RQFYLAAMFA VILYITYQIG TMAMYVFSMP LNEALVLAGS 420 TRYCRSILLT VFYVILILYM KILSRLNRVN IKNTVSCIAL VAAVIVTWGF TNNSFQLFFN 480 IPGDNCPEER KWIESNAERY NIPEGAKCCI LAPENNRGYL RYICRYVLQS PQIKAETVSS 540 QEDLEGVTDW DYVFIYDNEN PIIQDWIQEY YPDQLNQNVI VKGE 584
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUZ2-F1-model_v4 | 89 | 583 | 8 | 475 | 0.639 |
0.7328 |
| AF-O06152-F1-model_v4 | 82 | 582 | 51 | 555 | 0.5836 |
0.676 |
| AF-F1M7C0-F1-model_v4 | 30 | 576 | 14 | 620 | 0.5497 |
0.6484 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-E1X3W3-F1-model_v4 | GT83 | 82 | 584 | 1 | 471 | 0.651 |
0.741 |
| AF-A0A518B1Q4-F1-model_v4 | GT83 | 29 | 583 | 4 | 485 | 0.6488 |
0.7385 |
| AF-A0A060A3J1-F1-model_v4 | GT83 | 32 | 584 | 1 | 546 | 0.6473 |
0.6862 |
| AF-M1R7D2-F1-model_v4 | GT83 | 85 | 584 | 3 | 460 | 0.6473 |
0.744 |
| AF-A0A059ZVT9-F1-model_v4 | GT83 | 82 | 584 | 2 | 546 | 0.647 |
0.7377 |
| AF-B4U8T7-F1-model_v4 | GT83 | 85 | 584 | 3 | 460 | 0.6454 |
0.7429 |
| AF-A0A3G7HBU3-F1-model_v4 | GT83 | 88 | 584 | 6 | 465 | 0.6442 |
0.7403 |
| AF-A0A7G7VKD1-F1-model_v4 | GT83 | 86 | 584 | 2 | 485 | 0.6421 |
0.7189 |
| AF-I4BYW5-F1-model_v4 | GT83 | 85 | 584 | 7 | 494 | 0.642 |
0.7218 |
| AF-Q9HUZ2-F1-model_v4 | GT83 | 89 | 583 | 8 | 475 | 0.6391 |
0.7329 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P6G6D4 | GT83 | 88 | 584 | 11 | 470 | 0.6582 |
0.7606 |
| ATH06731.1 | GT83 | 83 | 584 | 7 | 474 | 0.6532 |
0.7493 |
| E1X3W3 | GT83 | 82 | 584 | 1 | 471 | 0.651 |
0.741 |
| A0A0F7XTI1 | GT83 | 32 | 584 | 1 | 469 | 0.6508 |
0.7407 |
| A0A1Y0HA72 | GT83 | 87 | 584 | 15 | 488 | 0.6495 |
0.7421 |
| A0A518B1Q4 | GT83 | 29 | 583 | 4 | 485 | 0.6488 |
0.7385 |
| A0A1B3X237 | GT83 | 86 | 584 | 2 | 486 | 0.6455 |
0.7223 |
| B4U8T7 | GT83 | 85 | 584 | 3 | 460 | 0.6454 |
0.7429 |
| WEJ74028.1 | GT83 | 88 | 584 | 10 | 471 | 0.6429 |
0.7503 |
| I4BYW5 | GT83 | 85 | 584 | 7 | 494 | 0.642 |
0.7218 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MJ96-F1-model_v4 | 87 | 584 | 8 | 498 | 0.6088 |
0.683 |
| AF-Q1MJ94-F1-model_v4 | 87 | 584 | 8 | 494 | 0.5995 |
0.6766 |