PROTEIN: HRGMv2_2438_54_29
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Protein File & Metadata
Source:
HRGMv2_2438_54_29.pdb
Genome ID:
Protein ID:
HRGMv2_2438_54_29
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Detailed structural information will appear here after analysis...
Protein Sequence
MLCDADDRMP RDALQVLLGN AEKYEADCVC GNMRRTFKNM PIPDRFVKFV PPCFRSGEAQ 60 IYDHTAVMKD LYVSCFGISN YPVSLCAKLY RRELLTDAAK DAPTVRYMGD DLSVTLRIMP 120 NIRKLVIIPD TVYYYRMGGG TSKFMPYMLD DFLSLYCWKD KLRQQYEMDE SVKILIDIEL 180 MNIVISFLQM CKCQGGFNET EIRKEVLNVI SISEIKRTAD SLIKNRNCHY VAKWIQNNDV 240 NSVVNYLEEY YKKTKLKRTI KKLLKI 266
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A286V0T0-F1-model_v4 | 1 | 257 | 87 | 342 | 0.69 |
0.8283 |
| AF-A0A133CIJ8-F1-model_v4 | 1 | 261 | 88 | 339 | 0.6639 |
0.8053 |
| AF-Q8ZL53-F1-model_v4 | 1 | 241 | 90 | 329 | 0.6127 |
0.7743 |
| AF-O05154-F1-model_v4 | 1 | 256 | 89 | 349 | 0.5838 |
0.7054 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3G6JC22-F1-model_v4 | GT2 | 1 | 260 | 2 | 260 | 0.8075 |
0.8438 |
| AF-A0A221MEB9-F1-model_v4 | GT2 | 1 | 264 | 86 | 347 | 0.7731 |
0.9053 |
| AF-A0A0B5AVE8-F1-model_v4 | GT2 | 1 | 264 | 86 | 349 | 0.7714 |
0.899 |
| AF-A0A0B5AVR7-F1-model_v4 | GT2 | 1 | 264 | 85 | 347 | 0.7692 |
0.8988 |
| WHY71035.1 | GT2 | 1 | 265 | 87 | 350 | 0.7677 |
0.8937 |
| AF-A0A7G8UVI6-F1-model_v4 | GT2 | 1 | 264 | 86 | 350 | 0.7604 |
0.902 |
| AF-A0A1Y1CQ90-F1-model_v4 | GT2 | 1 | 258 | 94 | 346 | 0.7416 |
0.9028 |
| AF-Q3ZK43-F1-model_v4 | GT2 | 1 | 256 | 30 | 280 | 0.7384 |
0.8243 |
| AF-A0A7H1DWD5-F1-model_v4 | GT2 | 1 | 261 | 90 | 342 | 0.7371 |
0.8907 |
| AF-A0A4P7VUJ3-F1-model_v4 | GT2 | 1 | 260 | 93 | 342 | 0.7342 |
0.8975 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A221MEB9 | GT2 | 1 | 264 | 86 | 347 | 0.7731 |
0.9053 |
| A0A0B5AVE8 | GT2 | 1 | 264 | 86 | 349 | 0.7714 |
0.899 |
| A0A0B5AVR7 | GT2 | 1 | 264 | 85 | 347 | 0.7692 |
0.8988 |
| WHY71035.1 | GT2 | 1 | 265 | 87 | 350 | 0.7677 |
0.8937 |
| A0A7G8UVI6 | GT2 | 1 | 264 | 86 | 350 | 0.7604 |
0.902 |
| A0A1Y1CQ90 | GT2 | 1 | 258 | 94 | 346 | 0.7416 |
0.9028 |
| A0A7H1DWD5 | GT2 | 1 | 261 | 90 | 342 | 0.7371 |
0.8907 |
| A0A4P7VUJ3 | GT2 | 1 | 260 | 93 | 342 | 0.7342 |
0.8975 |
| A0A5S4UYB8 | GT2 | 1 | 257 | 91 | 346 | 0.7299 |
0.8685 |
| QUC03744.1 | GT2 | 1 | 260 | 86 | 345 | 0.7205 |
0.8453 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71059-F1-model_v4 | 1 | 260 | 87 | 344 | 0.711 |
0.8414 |
| AF-P71057-F1-model_v4 | 1 | 266 | 88 | 344 | 0.6811 |
0.8108 |
| AF-Q5HI28-F1-model_v4 | 1 | 253 | 89 | 346 | 0.5871 |
0.7167 |
| AF-Q8NXS4-F1-model_v4 | 1 | 253 | 89 | 346 | 0.5871 |
0.7164 |
| AF-Q6GJ30-F1-model_v4 | 1 | 256 | 89 | 349 | 0.5859 |
0.7077 |
| AF-O05154-F1-model_v4 | 1 | 256 | 89 | 349 | 0.5838 |
0.7054 |
| AF-Q99VX6-F1-model_v4 | 1 | 256 | 89 | 349 | 0.5835 |
0.7049 |