PROTEIN: HRGMv2_2438_40_21
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Protein File & Metadata
Source:
HRGMv2_2438_40_21.pdb
Genome ID:
Protein ID:
HRGMv2_2438_40_21
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Protein Sequence
MVEQIWEIGR AMFLFLSFWG YIFVAVRFGK IKGWFAPIVC MSGIALILFW AGLFNCLTVA 60 ADLILTGGIA GFSIFLILCI QGKTGHLKWN PAEFCFGVGA AAFILLSLNL RLIHYDNFSH 120 WAVIVKYLLS AGKLPGADIT LIPFRDYPPG SSMFIYYVCR YAGHSQGMML LAQNSMILAC 180 FLAVFGIVKE KRRFLLYSFL GMGCSVLSYL NLTIRMNNLL VDFLLPLLTM ASVAVSYRCR 240 TDRRKFCIMQ ITLLGFTAIV KSTGGFFAGV AGVYALWELF RSEKRSERIK EKTGGKLFCA 300 ATIICGAVLP PLAWQYHLDT QLAGFKGKFE GGFHVGRELY GQVTENFLKT ALDLSGRAAQ 360 MFFLCIVLAA AAILYARFKL RKRWRLELIL PAGIVMTVLY YAGMLYMYLH SMPEEEAVRL 420 AGFERYACSV IVLFAGVLIM GATVDLEHSF AVDIDMRGAY RAFSSPGAKR RYQYAVLGTV 480 ILGANFLYSE FNGLRSIQET YETSLPGQAE QIMGDRWYEN GVPDKGKYLV IASDEDGQVS 540 SGEVRYVCRY FLWAPDVEVT DRLSESELAE AGKKYDHIFI LDETSPSGSR 590
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CD98-F1-model_v4 | 4 | 584 | 1 | 641 | 0.625 |
0.6835 |
| AF-P72045-F1-model_v4 | 4 | 584 | 1 | 653 | 0.6205 |
0.684 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2Z4Y6P6-F1-model_v4 | GT83 | 86 | 585 | 4 | 488 | 0.6293 |
0.7125 |
| AF-A0A0U3HVW7-F1-model_v4 | GT83 | 89 | 590 | 4 | 459 | 0.6281 |
0.7294 |
| AF-A0A2K8S0A0-F1-model_v4 | GT83 | 88 | 590 | 4 | 480 | 0.6267 |
0.7113 |
| AF-A0A0K1PEQ4-F1-model_v4 | GT83 | 86 | 590 | 6 | 483 | 0.6196 |
0.7066 |
| AF-A0A6M8W970-F1-model_v4 | GT83 | 87 | 583 | 10 | 512 | 0.6143 |
0.6982 |
| AF-A0A516WBX8-F1-model_v4 | GT83 | 86 | 590 | 40 | 521 | 0.6089 |
0.7156 |
| AF-A0A345ZN33-F1-model_v4 | GT83 | 86 | 585 | 8 | 490 | 0.6081 |
0.6996 |
| AF-A0A517XRV6-F1-model_v4 | GT83 | 87 | 586 | 29 | 492 | 0.6076 |
0.7337 |
| AF-A0A5K6E7C4-F1-model_v4 | GT83 | 88 | 585 | 13 | 505 | 0.6059 |
0.6971 |
| AF-A0A6G8AHP3-F1-model_v4 | GT83 | 85 | 585 | 7 | 498 | 0.6053 |
0.69 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2Z4Y6P6 | GT83 | 86 | 585 | 4 | 488 | 0.6293 |
0.7125 |
| A0A1W6Z8K7 | GT83 | 33 | 590 | 1 | 488 | 0.6239 |
0.7074 |
| A0A0K1PEQ4 | GT83 | 86 | 590 | 6 | 483 | 0.6196 |
0.7066 |
| A0A845N4G5 | GT83 | 88 | 590 | 18 | 493 | 0.6172 |
0.7143 |
| A0A6M8W970 | GT83 | 87 | 583 | 10 | 512 | 0.6143 |
0.6982 |
| A0A142BGT3 | GT83 | 90 | 590 | 24 | 495 | 0.6126 |
0.7129 |
| A0A516WBX8 | GT83 | 86 | 590 | 40 | 521 | 0.6089 |
0.7156 |
| BCA78249.1 | GT83 | 90 | 590 | 10 | 511 | 0.6088 |
0.6845 |
| A0A380ZZV2 | GT83 | 88 | 585 | 22 | 517 | 0.6 |
0.6926 |
| A0A2S0MD56 | GT83 | 89 | 590 | 23 | 562 | 0.5982 |
0.6941 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.