PROTEIN: HRGMv2_2438_22_8
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Protein File & Metadata
Source:
HRGMv2_2438_22_8.pdb
Genome ID:
Protein ID:
HRGMv2_2438_22_8
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Protein Sequence
MKKRVVAVLM AAVTVAGLLA GCGGSTDSGS GSGGAESTEE GKVINIYSWN DEFRTRLEAV 60 YPEVESTSDD GTVTTLKDGT EIHWIINPNQ DGVYQQKLDE ALLNQADAAA DDKVDIFLSE 120 TDYVFKYTDA DANVAMPLTD LGIDPDTELA DQYEFTKTTA SDQNGVQRGS TWQCCPGLLV 180 YRRDIAKDVF GTDDPQKVGE KVKDWDTLKA TAEELKEKGY YTFASYADTF RLYGNSIDEP 240 WVESGDTVVK VNQNIMDWVN DSKEWLDAGY FDSTVKGQWN DDWNKAMSSS SKVFAFLFPA 300 WGVDFTLNPN WDGEEGAWAV TNPPQEYNWG GSYIHACTGT DNPEHVKDII LSLTADKDNL 360 LKISKDYLDY TNTVSGMQEA AQSDEFASDF LGGQNAYEYY APVAENIQIA PLSAYDQGCV 420 ELIQNSFSDY FQGNVDFDRA KENFETAIKE RYPDITEIQW PE 462
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 10 | 455 | 33 | 439 | 0.7308 |
0.8212 |
| AF-K0F8J3-F1-model_v4 | 40 | 456 | 29 | 436 | 0.6964 |
0.7816 |
| AF-O53485-F1-model_v4 | 41 | 456 | 35 | 439 | 0.6937 |
0.7853 |
| AF-Q7AQ51-F1-model_v4 | 41 | 456 | 34 | 445 | 0.6932 |
0.7771 |
| AF-Q9CBN6-F1-model_v4 | 40 | 454 | 38 | 446 | 0.6915 |
0.7816 |
| AF-K0EMP7-F1-model_v4 | 19 | 456 | 19 | 444 | 0.6889 |
0.7503 |
| AF-A0A133CKQ7-F1-model_v4 | 1 | 456 | 3 | 419 | 0.6882 |
0.7419 |
| AF-A0A132Z3C8-F1-model_v4 | 41 | 454 | 33 | 428 | 0.6867 |
0.7856 |
| AF-A0A133CDW9-F1-model_v4 | 39 | 457 | 39 | 442 | 0.6831 |
0.7802 |
| AF-P59214-F1-model_v4 | 35 | 458 | 35 | 423 | 0.6758 |
0.7809 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K8EJG7 | CBM50 , CE4 | 39 | 457 | 32 | 416 | 0.6668 |
0.7732 |
| A0A7U1BNH7 | GH10 | 39 | 460 | 28 | 738 | 0.5428 |
0.7336 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 40 | 453 | 1 | 393 | 0.8245 |
0.9035 |
| 3uor-assembly2.cif.gz_B | 42 | 457 | 1 | 389 | 0.7608 |
0.8473 |
| 6x84-assembly2.cif.gz_B | 39 | 456 | 1 | 411 | 0.7429 |
0.8059 |
| 6dtr-assembly1.cif.gz_A | 39 | 456 | 1 | 393 | 0.7396 |
0.8164 |
| 4rk2-assembly1.cif.gz_A | 40 | 453 | 1 | 393 | 0.7392 |
0.8163 |
| 7nbz-assembly1.cif.gz_A | 39 | 458 | 1 | 377 | 0.7389 |
0.8298 |
| 7vfq-assembly2.cif.gz_B | 41 | 459 | 1 | 396 | 0.7377 |
0.8132 |
| 7vfr-assembly1.cif.gz_A | 41 | 459 | 1 | 397 | 0.7373 |
0.8116 |
| 2z8d-assembly2.cif.gz_B | 36 | 459 | 1 | 399 | 0.737 |
0.81 |
| 7vfq-assembly4.cif.gz_D | 41 | 459 | 1 | 397 | 0.7362 |
0.8106 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 39 | 453 | 26 | 422 | 0.7563 |
0.8527 |
| AF-Q9KEE7-F1-model_v4 | 41 | 456 | 44 | 445 | 0.7252 |
0.8307 |
| AF-Q8FVS7-F1-model_v4 | 39 | 456 | 23 | 411 | 0.7002 |
0.7986 |
| AF-Q578M8-F1-model_v4 | 39 | 456 | 23 | 411 | 0.6993 |
0.7977 |
| AF-Q2YKZ9-F1-model_v4 | 39 | 456 | 23 | 411 | 0.6981 |
0.7963 |
| AF-O31518-F1-model_v4 | 35 | 454 | 28 | 427 | 0.6921 |
0.783 |
| AF-O07009-F1-model_v4 | 31 | 457 | 26 | 419 | 0.6919 |
0.7893 |
| AF-Q00749-F1-model_v4 | 39 | 457 | 33 | 420 | 0.6917 |
0.7963 |
| AF-O06989-F1-model_v4 | 40 | 457 | 34 | 416 | 0.6866 |
0.7978 |
| AF-P9WGU8-F1-model_v4 | 41 | 456 | 32 | 465 | 0.6859 |
0.7789 |