PROTEIN: HRGMv2_2399_13_39
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Protein File & Metadata
Source:
HRGMv2_2399_13_39.pdb
Genome ID:
Protein ID:
HRGMv2_2399_13_39
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Protein Sequence
MSMNQRFGQY RSILSQSPQH ESAIKECISR QNGLDDYDKI FLHVCAPAAV EFVRWILEQA 60 EQDKKKRLYF LSRDGWLFYQ LAEKFVEKYN YPIELRYLHV SRYSMRSAGY HLMGEDCLDK 120 ICVGMMDATF EKLMKQASLT DAEAYEIAQL AGYEQRYRQK LSYRTILQLK ETLRGIPEFL 180 VYVSAHAKAC YDTAVSYLKQ EGLFDAVSYA VVDSGWMGTL KQSMELLTGR PVMGYYFGLY 240 EYPKDADISD YKAFYFQPYS QLKRKVYFSN CLFEAIFSSP EQMVVRYEPE KSPDGGMSYV 300 PVGCGISNPN TEKMKRNLLL LGQYADEYLK TVQTDDGSGG QAGMIYRLFH LFMGRPESRE 360 AEVFGALRFC DDMLESKLIP LAEAFLAEEI TERSFINRML IKMNIRKKAF PESAWPEGSV 420 VLYGKRINCH LFQEYLYKYV MYMRKAAGKG KKHERNDKYH 460
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 8 | 432 | 206 | 631 | 0.6508 |
0.8183 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 10 | 448 | 647 | 1091 | 0.5807 |
0.8564 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 10 | 447 | 629 | 1067 | 0.5774 |
0.8476 |
| A0A1I7GMF6 | GT2 | 11 | 443 | 636 | 1083 | 0.5748 |
0.8567 |
| A0A974WXG9 | GT4 | 1 | 437 | 183 | 1078 | 0.5707 |
0.8477 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 32 | 437 | 8 | 403 | 0.5571 |
0.7657 |
| A0A9J7AXY3 | GT2 | 33 | 458 | 7 | 501 | 0.5434 |
0.7327 |
| V4JBH5 | GT2 | 3 | 460 | 2 | 758 | 0.5403 |
0.6912 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 27 | 440 | 2 | 405 | 0.5374 |
0.7793 |
| QRK05458.1 | GT4 | 13 | 458 | 249 | 996 | 0.5341 |
0.7937 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 441 | 552 | 970 | 0.5279 |
0.7996 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 10 | 447 | 629 | 1067 | 0.5774 |
0.8476 |
| A0A1I7GMF6 | GT2 | 11 | 443 | 636 | 1083 | 0.5748 |
0.8567 |
| A0A974WXG9 | GT4 | 1 | 437 | 183 | 1078 | 0.5707 |
0.8477 |
| A0A0U5F758 | GT2 | 32 | 437 | 8 | 403 | 0.5571 |
0.7657 |
| A0A9J7AXY3 | GT2 | 33 | 458 | 7 | 501 | 0.5434 |
0.7327 |
| V4JBH5 | GT2 | 3 | 460 | 2 | 758 | 0.5403 |
0.6912 |
| A0A0H3KC95 | GT2 | 27 | 440 | 2 | 405 | 0.5374 |
0.7793 |
| QRK05458.1 | GT4 | 13 | 458 | 249 | 996 | 0.5341 |
0.7937 |
| U5MZQ8 | GT2 | 1 | 438 | 552 | 966 | 0.5228 |
0.7993 |
| M4S1R1 | GT4 | 13 | 436 | 219 | 699 | 0.5226 |
0.7849 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 14 | 367 | 241 | 591 | 0.567 |
0.8284 |
| 8a0m-assembly1.cif.gz_B | 4 | 436 | 457 | 876 | 0.5355 |
0.7915 |
| 8a0c-assembly1.cif.gz_A | 4 | 436 | 595 | 1028 | 0.5311 |
0.7973 |
| 8a0m-assembly2.cif.gz_C | 4 | 436 | 591 | 1024 | 0.5304 |
0.7959 |
| 8a0m-assembly1.cif.gz_A | 4 | 436 | 590 | 1023 | 0.5299 |
0.7949 |
| 8a0c-assembly1.cif.gz_B | 4 | 436 | 595 | 1025 | 0.5239 |
0.7893 |
| 8a0m-assembly2.cif.gz_D | 5 | 436 | 487 | 887 | 0.5067 |
0.7839 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.