PROTEIN: HRGMv2_2377_32_17
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Protein File & Metadata
Source:
HRGMv2_2377_32_17.pdb
Genome ID:
Protein ID:
HRGMv2_2377_32_17
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Protein Sequence
MSKIRKIWKI IVVVTAYLYI PLMITLLFNG NAAKYADVPV EVTDGSIKGR KVNIVYNNAV 60 QAVSLNDFVA MSVAKEYNKG GSQGSSSESA SNSNGGSGSG SGSGSGSASG IADQEQMVKA 120 LAVVIRSDVV CQMNKRNEID SDQLENGFLT RSQMKSKWGN DWQNVFAQIR QWVDETDNQI 180 IEYKENHIRA MYTRVSPGKT MSGSRLLGEE YEYLAEIDCA KDTESPDYMV TTEFDNSKII 240 STVRDWKKKT GMDCGIDESN PSGDIQITAK TDDGYITGMQ VGDLCMSGEQ FASMMGLKSA 300 YLTLEYKKDS IRITSKGVGM GFGMSLYSAN IMALDGSDYQ EIIKHFYPEC IITSL 355
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975LGA7 | CBM50 | 13 | 355 | 99 | 568 | 0.5483 |
0.7041 |
| A0A975LLJ1 | CBM50 | 37 | 355 | 201 | 563 | 0.5293 |
0.7232 |
| AF-A0A6M6E844-F1-model_v4 | CBM50 | 31 | 355 | 43 | 460 | 0.4672 |
0.7198 |
| AF-D5ETB0-F1-model_v4 | GT2 | 31 | 355 | 827 | 1222 | 0.4328 |
0.7316 |
| C9MMY7 | GT2 | 31 | 355 | 813 | 1242 | 0.4293 |
0.7274 |
| AF-A0A2K9H6Y3-F1-model_v4 | GT2 | 31 | 355 | 819 | 1248 | 0.4291 |
0.7285 |
| AF-A0A250KHW7-F1-model_v4 | GT2 | 32 | 355 | 818 | 1247 | 0.429 |
0.7313 |
| AF-A0A0K1NIT7-F1-model_v4 | GT2 | 32 | 355 | 818 | 1247 | 0.4289 |
0.7306 |
| AF-A0A7D4G7S7-F1-model_v4 | GT2 | 32 | 355 | 818 | 1247 | 0.4281 |
0.7291 |
| UKK47266.1 | GT2 | 32 | 355 | 868 | 1265 | 0.4269 |
0.7289 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975LGA7 | CBM50 | 13 | 355 | 99 | 568 | 0.5483 |
0.7041 |
| A0A975LLJ1 | CBM50 | 37 | 355 | 201 | 563 | 0.5293 |
0.7232 |
| A0A6M6E844 | CBM50 | 31 | 355 | 43 | 460 | 0.4672 |
0.7198 |
| C9MMY7 | GT2 | 31 | 355 | 813 | 1242 | 0.4293 |
0.7274 |
| UKK47266.1 | GT2 | 32 | 355 | 868 | 1265 | 0.4269 |
0.7289 |
| A0A6N3FW23 | GT2 | 32 | 355 | 862 | 1293 | 0.4221 |
0.7243 |
| A0A2N6QR17 | GT2 | 31 | 355 | 895 | 1262 | 0.4211 |
0.7177 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5txu-assembly1.cif.gz_A | 47 | 355 | 3 | 284 | 0.7267 |
0.8317 |
| 4rwr-assembly2.cif.gz_B | 46 | 355 | 4 | 263 | 0.6842 |
0.8193 |
| 4rwr-assembly1.cif.gz_A | 46 | 355 | 4 | 264 | 0.681 |
0.8111 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P07372-F1-model_v4 | 46 | 355 | 57 | 332 | 0.6398 |
0.8141 |
| AF-P13251-F1-model_v4 | 46 | 355 | 58 | 333 | 0.6324 |
0.8052 |
| AF-C0QYX7-F1-model_v4 | 32 | 355 | 16 | 354 | 0.6138 |
0.6984 |
| AF-Q02113-F1-model_v4 | 32 | 355 | 35 | 705 | 0.4842 |
0.7041 |