PROTEIN: HRGMv2_2326_2_235
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Protein File & Metadata
Source:
HRGMv2_2326_2_235.pdb
Genome ID:
Protein ID:
HRGMv2_2326_2_235
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Protein Sequence
MKAKRLLALI CCTALTAGMF AGCGSSDGKK DNTSDGAKKE VTDDLSEHLD ITIGGINLSD 60 SDSLEGYPTE IVEDLEEKFN VTLKIKSYDN ESLNLDLSGG TTCDIVQIND DHIEGVLKGK 120 HAVNLENYKD TLAKNIFRED MEFRNNVMKT FKSNGEDVQY FVTPRVTFGD TEANYGTVLN 180 NGYVVRWDLY KEIGCPEINN DEDYIKALKA MKEIYPETED GLPVYAMSAY NDSQLHSYFY 240 NGCLTQGFVN LEGGIYVQSV ENNELYPDIY DVDNPDVLTP FWSGVQFYNQ LYREGLLDPD 300 CFITKAEDLQ EKYTKGQYLG GNVNWHYGTY NENQRAEDPE TLKEYVTLPA KLGWANEKNL 360 AGWFGKYFFV SSHSPNVERA IMILDYLQSE EFSRKADSGV EGRWEKGEDG KPALTEDTIA 420 MKTDGSRLDE WKKAGIGGAL SDACGEDYYN VAEDGGRIDL WFEEDVLPKS MTFAEKDMCE 480 TLGLDVPSDM LKKKVEAGTS MDLGNCLNAI QMAMETTPKN IVRIDSNCEE ITLNAIPNLV 540 QAETDEEFAA AKAALMEELK GAGAEESVEW WTNAWKEAKT AIEELR 586
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133D019-F1-model_v4 | 6 | 581 | 16 | 485 | 0.6498 |
0.7468 |
| AF-A0A133CZN8-F1-model_v4 | 4 | 581 | 13 | 502 | 0.6357 |
0.7183 |
| AF-Q8DRJ6-F1-model_v4 | 9 | 584 | 37 | 514 | 0.5932 |
0.6916 |
| AF-Q8DNU2-F1-model_v4 | 23 | 574 | 13 | 445 | 0.5925 |
0.7049 |
| AF-A0A133CPC5-F1-model_v4 | 13 | 571 | 1 | 423 | 0.5885 |
0.6974 |
| AF-O53485-F1-model_v4 | 48 | 574 | 35 | 439 | 0.5794 |
0.7247 |
| AF-K0F8J3-F1-model_v4 | 6 | 574 | 15 | 434 | 0.5783 |
0.6985 |
| AF-Q8DNU8-F1-model_v4 | 1 | 574 | 2 | 440 | 0.5718 |
0.67 |
| AF-Q7AQ51-F1-model_v4 | 1 | 574 | 9 | 444 | 0.5707 |
0.6743 |
| AF-K0F002-F1-model_v4 | 25 | 571 | 25 | 439 | 0.5655 |
0.6923 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 17 | 584 | 17 | 506 | 0.6687 |
0.7564 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 17 | 584 | 17 | 506 | 0.6687 |
0.7564 |
| A0A1Q2TKJ3 | GH49 | 1 | 574 | 121 | 797 | 0.4561 |
0.5435 |
| A0A9Q8PNJ5 | GH4 | 4 | 571 | 14 | 866 | 0.4372 |
0.542 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5g62-assembly2.cif.gz_B | 47 | 586 | 1 | 491 | 0.7019 |
0.781 |
| 5xs8-assembly1.cif.gz_A | 48 | 579 | 1 | 474 | 0.7015 |
0.7919 |
| 5h6u-assembly1.cif.gz_A | 43 | 584 | 2 | 487 | 0.6942 |
0.7768 |
| 3vlw-assembly2.cif.gz_B | 42 | 583 | 3 | 489 | 0.6927 |
0.7752 |
| 4tqu-assembly1.cif.gz_Q | 42 | 586 | 5 | 492 | 0.6908 |
0.7743 |
| 6jhx-assembly2.cif.gz_B | 43 | 581 | 5 | 483 | 0.6892 |
0.7779 |
| 6fth-assembly1.cif.gz_A | 44 | 584 | 1 | 496 | 0.6872 |
0.7619 |
| 3omb-assembly1.cif.gz_A | 39 | 580 | 1 | 503 | 0.6844 |
0.7543 |
| 5g5y-assembly1.cif.gz_A | 44 | 586 | 1 | 494 | 0.6696 |
0.7456 |
| 5suo-assembly1.cif.gz_A | 47 | 584 | 1 | 451 | 0.6681 |
0.769 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 15 | 586 | 17 | 538 | 0.6677 |
0.7353 |
| AF-P37966-F1-model_v4 | 16 | 580 | 5 | 502 | 0.6609 |
0.7357 |
| AF-Q795R2-F1-model_v4 | 15 | 581 | 9 | 498 | 0.6113 |
0.6903 |
| AF-A0A0H2UMY0-F1-model_v4 | 1 | 584 | 16 | 491 | 0.5998 |
0.6887 |
| AF-Q9RUE8-F1-model_v4 | 44 | 574 | 18 | 420 | 0.5957 |
0.7335 |
| AF-Q8FVS7-F1-model_v4 | 45 | 571 | 22 | 411 | 0.5905 |
0.7396 |
| AF-Q578M8-F1-model_v4 | 45 | 571 | 22 | 411 | 0.5895 |
0.7383 |
| AF-Q2YKZ9-F1-model_v4 | 45 | 571 | 22 | 411 | 0.5884 |
0.737 |
| AF-Q7LYW7-F1-model_v4 | 42 | 574 | 38 | 450 | 0.5821 |
0.7239 |
| AF-O50499-F1-model_v4 | 11 | 580 | 20 | 469 | 0.5799 |
0.6849 |