PROTEIN: HRGMv2_2300_27_10
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2300_27_10.pdb
Genome ID:
Protein ID:
HRGMv2_2300_27_10
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKEIINQLKS NKKLHIAVYL FLGVFILECT LFNYKHWFSL GYETIDASDY ITEYGPGLSI 60 DEDGIHVNDT ASSFIRMQNM DFHIDNIYMD AISNTAPIIN VHLYSSDAAS YNLADRGATT 120 IADNTLLTNY FDVHLSGNTD DLAIFFTDAN SVINVGAIEF NKTVPFNFSF LRMAVMILLG 180 MFIIAFRPKS ELYNIKLFEA GRIKYILTTG CLIVISLMCI FIGNVINPDT TIANSTKNWW 240 PANEEYVDLA DAIIAGQLEL QRTPPASLAT IDNPYDPVKR EDTVNAANET FDWDYAYFEG 300 KYYCYFGVIP AVLFYVPYKL ITGNDLKTWD LAIFCTIIYC IVCFYFIYQL YKKYFDKASL 360 GAYLLSGIFL CFSSSIVYLI YLGLVYSIPI ITSLMFGLFG LGLWLSSCNT GSLIRWKMVA 420 GSVSIALIIG CRPQLVLIFI LAVPIFWNET IKERLFFSKK GILNTMLVML PFIIVGVAMM 480 AYNAARFHSP FDFGANYNLT GNDMTHRGWV WARFPLGIFT YVFEPLNVSA AYPFLNLCSQ 540 ANDYLGRTSY EPFMGGILAY NTLFVLNVLV FKLRKGLQEK KAFLMSLLPS VLGLIIMLLD 600 IQMSGITQRY LSDFSWMFAI TTVIVIVAVE EKLLGTSKGI KDCFYAIIAI GVCACVILNC 660 WNIFIDGRYF DLKTNNPELY YAVKCMLPLY 690
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EN63-F1-model_v4 | 205 | 679 | 1 | 528 | 0.5113 |
0.6546 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6G6XCA5-F1-model_v4 | GT39 | 196 | 680 | 5 | 413 | 0.5882 |
0.7597 |
| AF-Q2N984-F1-model_v4 | GT39 | 196 | 684 | 5 | 417 | 0.5882 |
0.753 |
| AF-A0A2Z5X2G0-F1-model_v4 | GT39 | 184 | 687 | 12 | 440 | 0.5869 |
0.7474 |
| AF-A0A0G9MS54-F1-model_v4 | GT39 | 196 | 684 | 5 | 421 | 0.5866 |
0.7481 |
| AF-A0A515L6J0-F1-model_v4 | GT39 | 196 | 684 | 6 | 418 | 0.5846 |
0.7499 |
| AF-A0A2L0GM15-F1-model_v4 | GT39 | 196 | 684 | 15 | 437 | 0.5841 |
0.7501 |
| A0A419R5Z1 | GT39 | 195 | 681 | 8 | 417 | 0.5836 |
0.7541 |
| AF-A0A345WT35-F1-model_v4 | GT39 | 200 | 680 | 4 | 400 | 0.5833 |
0.7612 |
| AF-A0A1D9DY79-F1-model_v4 | GT39 | 184 | 681 | 1 | 468 | 0.5793 |
0.7065 |
| AF-A0A5P9GUB3-F1-model_v4 | GT39 | 195 | 680 | 23 | 441 | 0.5715 |
0.7465 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A5GCG9 | GT39 | 193 | 687 | 1 | 401 | 0.603 |
0.7825 |
| A0A2Z5X2G0 | GT39 | 184 | 687 | 12 | 440 | 0.5869 |
0.7474 |
| A0A419R5Z1 | GT39 | 195 | 681 | 8 | 417 | 0.5836 |
0.7541 |
| A0A7T8ABR8 | GT39 | 193 | 680 | 5 | 424 | 0.5834 |
0.7457 |
| A0A4D7DF08 | GT39 | 194 | 684 | 15 | 436 | 0.5763 |
0.74 |
| WCO68223.1 | GT39 | 203 | 684 | 1 | 428 | 0.5751 |
0.7225 |
| G2IJ82 | GT39 | 196 | 680 | 15 | 420 | 0.5713 |
0.7494 |
| A0A7D4UI10 | GT39 | 12 | 680 | 1 | 478 | 0.5702 |
0.6897 |
| F6IN91 | GT39 | 195 | 687 | 35 | 448 | 0.5683 |
0.753 |
| A0A7G1INS7 | GT89 | 197 | 677 | 33 | 460 | 0.5545 |
0.7501 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.