PROTEIN: HRGMv2_2236_15_19
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Protein File & Metadata
Source:
HRGMv2_2236_15_19.pdb
Genome ID:
Protein ID:
HRGMv2_2236_15_19
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Protein Sequence
MWEQIKKKKT FYLLFLLIWV VQMLTAFYFC TQKQGFHEDE YYTYYSTART NGFYVEDGQW 60 MERETYRNEF VVLPGQQFQY GLVKQVQSWD VHPPVYYWVF HTVASLVPGV FSKWIGLAVN 120 LVFYGINICL LGYLSWLISG KNEKVTLLVT LFYGLTPAAF SGVVFIRMYE MLTAFVLLSA 180 ILHIKGLQKF SVKNVLLMMT VTYLGYLTQY YYFIFLFYLG FFFCCYLLWK KRSFRDCLIY 240 GGSQLVAFGL AYLTYSSCLG QMFRGQRGAQ ATENFFDGSN TLERISFFGN LLDEYVFGKC 300 LSVLILLILL LGLWLFYQKR RRANPERTEH KSEQKAGLGT AFFMLAFATA GYFLTVSKTA 360 LLLGDTSNRY QLPVYGMVVL LLFTLLAWMF GQMAIKGTYL WIMAGILCLI VDIIGLTSDR 420 VVFLYPQDKE ETAFARQQAQ ENSAAIYLYN EGADWCIWDV TNELLEYPAV YFASTSLEEP 480 LSDKTIENAD SLVVYVAQGE DVTMQLERIL HSNEKLTGYE QKWKEKYCDV YYFH 534
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 2 | 534 | 11 | 506 | 0.7143 |
0.7701 |
| AF-Q9CC27-F1-model_v4 | 1 | 534 | 17 | 526 | 0.7097 |
0.7563 |
| AF-Q9HUZ2-F1-model_v4 | 3 | 534 | 1 | 474 | 0.7017 |
0.7661 |
| AF-O06152-F1-model_v4 | 1 | 534 | 46 | 555 | 0.701 |
0.765 |
| AF-Q8VDB2-F1-model_v4 | 1 | 534 | 1 | 482 | 0.6836 |
0.7404 |
| AF-A0A0R4IE52-F1-model_v4 | 3 | 534 | 1 | 492 | 0.68 |
0.7327 |
| AF-A0A0K0DXE0-F1-model_v4 | 12 | 534 | 1 | 492 | 0.6799 |
0.7254 |
| AF-B1WBY3-F1-model_v4 | 2 | 534 | 1 | 484 | 0.6791 |
0.7345 |
| AF-A0A5K4FC45-F1-model_v4 | 10 | 534 | 1 | 518 | 0.6717 |
0.7055 |
| AF-A0A0K0EAE5-F1-model_v4 | 12 | 534 | 1 | 490 | 0.6686 |
0.7182 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCY11543.1 | GT83 | 1 | 534 | 1 | 471 | 0.7496 |
0.8181 |
| AF-A3CVJ8-F1-model_v4 | GT0 | 1 | 534 | 45 | 513 | 0.749 |
0.8454 |
| AF-A0A0X3BL36-F1-model_v4 | GT0 | 1 | 534 | 28 | 510 | 0.7483 |
0.8208 |
| A0A543NUS7 | GT83 | 11 | 534 | 1 | 474 | 0.7453 |
0.8054 |
| AF-A0A7D3ZKU3-F1-model_v4 | GT83 | 15 | 534 | 1 | 459 | 0.7436 |
0.8153 |
| AF-A0A2H5AZW5-F1-model_v4 | GT83 | 8 | 534 | 1 | 470 | 0.7428 |
0.8087 |
| AF-A0A3T0SXA0-F1-model_v4 | GT83 | 2 | 534 | 4 | 492 | 0.7419 |
0.7977 |
| AF-Q1IJH5-F1-model_v4 | GT83 | 4 | 534 | 10 | 481 | 0.7403 |
0.8098 |
| AF-I4BYW5-F1-model_v4 | GT83 | 1 | 534 | 1 | 492 | 0.7403 |
0.7918 |
| AF-E4NCG6-F1-model_v4 | GT83 | 11 | 534 | 1 | 469 | 0.7401 |
0.8049 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCY11543.1 | GT83 | 1 | 534 | 1 | 471 | 0.7496 |
0.8181 |
| A0A543NUS7 | GT83 | 11 | 534 | 1 | 474 | 0.7453 |
0.8054 |
| A0A0F0L4U4 | GT83 | 1 | 534 | 1 | 489 | 0.7441 |
0.7959 |
| A0A7D3ZKU3 | GT83 | 15 | 534 | 1 | 459 | 0.7436 |
0.8153 |
| UCR88156.1 | GT83 | 1 | 534 | 3 | 496 | 0.7418 |
0.793 |
| Q1IJH5 | GT83 | 4 | 534 | 10 | 481 | 0.7403 |
0.8098 |
| I4BYW5 | GT83 | 1 | 534 | 1 | 492 | 0.7403 |
0.7918 |
| A0A3G8VNE0 | GT83 | 2 | 534 | 14 | 504 | 0.7401 |
0.7994 |
| A0A1B1BQ47 | GT83 | 1 | 534 | 9 | 504 | 0.7384 |
0.795 |
| BCJ40713.1 | GT83 | 2 | 534 | 13 | 501 | 0.7377 |
0.7976 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5f15-assembly1.cif.gz_A | 6 | 534 | 1 | 541 | 0.6409 |
0.6717 |
| 5ezm-assembly1.cif.gz_A | 6 | 534 | 1 | 537 | 0.636 |
0.6645 |
| 6s7o-assembly1.cif.gz_A | 1 | 533 | 3 | 643 | 0.6137 |
0.6908 |
| 8b6l-assembly1.cif.gz_I | 2 | 533 | 1 | 672 | 0.6034 |
0.692 |
| 8age-assembly1.cif.gz_A | 1 | 533 | 2 | 607 | 0.6014 |
0.672 |
| 7oci-assembly1.cif.gz_F | 1 | 533 | 2 | 601 | 0.6005 |
0.6687 |
| 8agc-assembly1.cif.gz_A | 1 | 533 | 1 | 660 | 0.5998 |
0.6918 |
| 8agb-assembly1.cif.gz_A | 1 | 533 | 1 | 604 | 0.5994 |
0.6688 |
| 6c26-assembly1.cif.gz_A | 1 | 534 | 2 | 611 | 0.5984 |
0.6693 |
| 6ftg-assembly1.cif.gz_5 | 1 | 534 | 8 | 641 | 0.5966 |
0.6657 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67601-F1-model_v4 | 11 | 534 | 1 | 416 | 0.7036 |
0.8053 |
| AF-Q8VDB2-F1-model_v4 | 1 | 534 | 1 | 482 | 0.6836 |
0.7404 |
| AF-Q9BV10-F1-model_v4 | 3 | 534 | 1 | 484 | 0.6808 |
0.736 |
| AF-O67270-F1-model_v4 | 9 | 534 | 1 | 496 | 0.6685 |
0.7131 |
| AF-Q7N3Q9-F1-model_v4 | 5 | 534 | 1 | 550 | 0.6653 |
0.7005 |
| AF-B4EUL1-F1-model_v4 | 7 | 534 | 4 | 547 | 0.6646 |
0.6992 |
| AF-Q1MLH5-F1-model_v4 | 10 | 533 | 1 | 464 | 0.6642 |
0.7353 |
| AF-Q4ZSZ0-F1-model_v4 | 7 | 534 | 1 | 545 | 0.6607 |
0.6968 |
| AF-A1JPM4-F1-model_v4 | 6 | 534 | 1 | 551 | 0.6606 |
0.6978 |
| AF-Q66A06-F1-model_v4 | 6 | 534 | 1 | 550 | 0.6599 |
0.6968 |