PROTEIN: HRGMv2_2235_24_21
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Protein File & Metadata
Source:
HRGMv2_2235_24_21.pdb
Genome ID:
Protein ID:
HRGMv2_2235_24_21
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Protein Sequence
MKKNTLHKVM ATALVGAMAM STLTGCGSSA DTGADASTKD TAAATTAAST EAAASDAVAG 60 IDGWEPFTDN VTLQIPVYDR GSSGNGCSDV ENNYWTKWVQ ENFGDKYNIT VEYVGITRSD 120 VMTDYAMLAA SQSLPTICME YDYDKLATWQ ADGYLQTYDV EEFKQIAPTY WETMVEHGND 180 AYTKLADEDY LVLGYRPYGN TTYTWCTFYR QDWLEEAGFD EYPAGDNTKL LELYAKLVEN 240 GHKYPLSGKK VSGAGIDQNY GYRDYPQDET TWATTGDYQI PALSTEAQKR FLKFENELYN 300 DGYYNPEYYL RDASEAEADF INGEAFTWTG YISSTMNVLN SFYDTNPDGK LAVAVTPSTW 360 TQDATWGSSA SYRPGTNFGM MIGFANDATE DEIKAAMMYL EWLNQPENLF TMQWGIEGVN 420 FNYDDNGDPV AVADQTGLDE QQGHNNNVDY WCAVTAVKTL GSIEKDIKAV SPQGLPQDFY 480 DQILANYNGQ VALYEAGKAN SDCLFATSID AVSEYNQTLY DLYTEYRDNL TMCSKDEFDA 540 LYDELSQKYL DAGYQEVIDQ RQEALDNGQT TRLQ 574
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 22 | 570 | 11 | 502 | 0.7233 |
0.8025 |
| AF-K0EWS5-F1-model_v4 | 67 | 561 | 23 | 455 | 0.632 |
0.7535 |
| AF-Q8DNU8-F1-model_v4 | 28 | 561 | 11 | 440 | 0.6273 |
0.7408 |
| AF-Q8DRJ6-F1-model_v4 | 36 | 574 | 41 | 513 | 0.5932 |
0.6918 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 57 | 572 | 40 | 506 | 0.6889 |
0.8049 |
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 13 | 561 | 84 | 797 | 0.4934 |
0.6045 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 67 | 568 | 26 | 744 | 0.4826 |
0.6209 |
| UJP10085.1 | GH154 | 1 | 533 | 31 | 1169 | 0.3614 |
0.5486 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 57 | 572 | 40 | 506 | 0.6889 |
0.8049 |
| A0A1Q2TKJ3 | GH49 | 13 | 561 | 84 | 797 | 0.4934 |
0.6045 |
| A0A7U1BNH7 | GH10 | 67 | 568 | 26 | 744 | 0.4826 |
0.6209 |
| UJP10085.1 | GH154 | 1 | 533 | 31 | 1169 | 0.3614 |
0.5486 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 70 | 571 | 1 | 474 | 0.7126 |
0.7961 |
| 6fth-assembly1.cif.gz_A | 67 | 573 | 1 | 496 | 0.712 |
0.7797 |
| 3omb-assembly1.cif.gz_A | 66 | 573 | 3 | 503 | 0.706 |
0.7718 |
| 6jhx-assembly2.cif.gz_B | 61 | 572 | 2 | 483 | 0.6986 |
0.7772 |
| 5h6u-assembly1.cif.gz_A | 61 | 573 | 1 | 487 | 0.6976 |
0.7719 |
| 3vlw-assembly2.cif.gz_B | 61 | 573 | 1 | 489 | 0.6955 |
0.7686 |
| 4tqu-assembly1.cif.gz_Q | 61 | 574 | 2 | 491 | 0.6954 |
0.7693 |
| 5g5y-assembly1.cif.gz_A | 65 | 574 | 1 | 494 | 0.6847 |
0.7539 |
| 5g62-assembly2.cif.gz_B | 70 | 574 | 1 | 491 | 0.6825 |
0.7535 |
| 5suo-assembly1.cif.gz_A | 70 | 573 | 1 | 451 | 0.6727 |
0.7693 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37966-F1-model_v4 | 65 | 572 | 30 | 502 | 0.7201 |
0.8269 |
| AF-Q795R2-F1-model_v4 | 57 | 569 | 34 | 498 | 0.6913 |
0.8037 |
| AF-Q8FVS7-F1-model_v4 | 67 | 560 | 21 | 411 | 0.6498 |
0.8054 |
| AF-Q578M8-F1-model_v4 | 67 | 560 | 21 | 411 | 0.6493 |
0.8047 |
| AF-Q2YKZ9-F1-model_v4 | 67 | 560 | 21 | 411 | 0.649 |
0.8043 |
| AF-O32156-F1-model_v4 | 38 | 563 | 18 | 422 | 0.6187 |
0.7546 |
| AF-O07009-F1-model_v4 | 53 | 564 | 27 | 421 | 0.6004 |
0.7475 |
| AF-O58969-F1-model_v4 | 25 | 574 | 2 | 441 | 0.598 |
0.694 |
| AF-Q9Z3R5-F1-model_v4 | 29 | 560 | 5 | 458 | 0.584 |
0.6715 |
| AF-D4GP35-F1-model_v4 | 21 | 560 | 12 | 459 | 0.5793 |
0.6738 |