PROTEIN: HRGMv2_2222_13_44
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Protein File & Metadata
Source:
HRGMv2_2222_13_44.pdb
Genome ID:
Protein ID:
HRGMv2_2222_13_44
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Protein Sequence
MKKGLYCLLA LLTVSVAAGC SVNQPDNTDN TTTESASESL SRYDEVLSEA EASADGWSDT 60 CVLGEDNWLI YYAKDGETLR IIQTKGTDVV EEHALAFREY CDVNCAFISM VDADTGYILC 120 CSSPGLSQMS KYLFKTTDGW NSYELTSEPD IHNYPTDMAF SDESTGIITT DYHGYDQYAY 180 QTIDGGNSWN GLTVDDFSDE AISYVEGDLI EWGNGQWTLT VSKILPDSRE TSVYRSKNGT 240 DWSLDSTNK 249
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z349-F1-model_v4 | 2 | 249 | 230 | 511 | 0.4861 |
0.6682 |
| AF-I1MLM5-F1-model_v4 | 12 | 249 | 102 | 332 | 0.4803 |
0.6624 |
| AF-O82370-F1-model_v4 | 63 | 241 | 69 | 240 | 0.4783 |
0.6739 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2H5BCD4-F1-model_v4 | GH0 | 11 | 249 | 43 | 394 | 0.5558 |
0.7541 |
| A0A1E7N6R5 | GH0 | 11 | 249 | 56 | 407 | 0.5517 |
0.7554 |
| AF-A0A518ID16-F1-model_v4 | GH33 | 4 | 242 | 79 | 353 | 0.5448 |
0.6826 |
| AF-A0A7L5A6C0-F1-model_v4 | GH43_18 | 14 | 249 | 46 | 297 | 0.5317 |
0.6575 |
| A0A9Q4JSI7 | GH0 | 9 | 242 | 48 | 326 | 0.5255 |
0.6489 |
| AF-A0A0E4HCD3-F1-model_v4 | GH43_10 | 29 | 249 | 55 | 286 | 0.5188 |
0.6692 |
| AF-A0A7L5E4Q0-F1-model_v4 | GH137 | 6 | 249 | 59 | 365 | 0.5041 |
0.6365 |
| AF-A0A7D4UFP2-F1-model_v4 | GH137 | 21 | 249 | 53 | 322 | 0.4789 |
0.6411 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A979H1M7 | GH33 | 9 | 249 | 58 | 332 | 0.5464 |
0.6897 |
| A0A7H8PZ90 | GH43 | 12 | 249 | 41 | 319 | 0.537 |
0.6565 |
| A0A7L5A6C0 | GH43_18 | 14 | 249 | 46 | 297 | 0.5317 |
0.6575 |
| A0A2S0VQ02 | GH43 | 11 | 249 | 74 | 361 | 0.5123 |
0.65 |
| A0A5P2S8Z6 | CBM13 , GH43_26 | 13 | 249 | 48 | 351 | 0.4783 |
0.6701 |
| UVE70145.1 | GH74 | 2 | 249 | 14 | 403 | 0.4578 |
0.707 |
| WDF81297.1 | CBM91 , GH43_9 | 14 | 249 | 40 | 315 | 0.4382 |
0.624 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O82370-F1-model_v4 | 63 | 241 | 69 | 240 | 0.4783 |
0.6739 |
| AF-Q9FKH1-F1-model_v4 | 6 | 249 | 135 | 440 | 0.475 |
0.6334 |