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PROTEIN: HRGMv2_2189_1_2641

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2189_1_2641.pdb
Genome ID:
HRGMv2_2189
Protein ID:
HRGMv2_2189_1_2641

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKRKVNALL   AIVLSLTMLV   GVTGCGKEQH   LEAEINPDTP   ATEVQFPLKE   TAELSFITSA 60
PATSTQEPNE   RVIFQRMEEQ   TNVHIDWTCF   VSDQFSDKKN   LALAQFGNLP   DGLFNAGMSD 120
YDLLRYAKQG   IIIPLENLID   KYMPNLQAVF   EKYPEYRTMC   TAPDGHIYSF   PWIEQLGAGK 180
EAIQAIGDIP   YINKKWLDYL   GLEIPTTTDE   LEQVLIQFRD   HADELEKEFS   IEGDVIPMSF 240
IINNGDQDPA   ILINGFGKGY   GDTGDHFAVT   DEGKVIYTTV   QEGYKEGIEW   LHKLVTEDLV 300
DPEAFTQEWS   TYVAKGKNHR   YGLCFTWDIA   NIDNNEDYVM   LPALTGPNGM   RNITRQNNSE 360
TSGFDRGRCV   LTSSCRNTAL   AAAWIDQMYA   PLQSPQNNWG   TYGEKDSFNI   FELSTNKDGG 420
EMLKHMDLGT   QSPVEVREAQ   SVNGPLAVLN   EYYDVYVTQP   EDAKWRLDNM   HETYLQDMNS 480
KYVYPNVFMS   IDDTNKVSQY   DTDIKKYAEQ   KKADWILNGG   IEKEWDSYLK   KMEQYGLSDY 540
LSIKQKYFDE   YQKSLSEEK 559
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 1 554 6 502 0.6867 0.751
AF-A0A133D019-F1-model_v4 11 554 18 485 0.6691 0.7577
AF-Q8DRJ6-F1-model_v4 15 556 40 514 0.6191 0.7129
AF-Q8DNU2-F1-model_v4 35 543 26 445 0.612 0.7342
AF-A0A133CPC5-F1-model_v4 47 540 30 423 0.6075 0.7512
AF-Q8DNU8-F1-model_v4 8 543 6 440 0.6042 0.7003
AF-K0F7X1-F1-model_v4 31 540 27 409 0.6036 0.753
AF-P19576-F1-model_v4 10 539 17 396 0.6032 0.7452
AF-A0A133CDW9-F1-model_v4 33 543 37 444 0.6012 0.7378
AF-K0EMP7-F1-model_v4 34 543 25 442 0.6007 0.7226
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 22 554 21 506 0.7166 0.7982
AF-A0A7U1BNH7-F1-model_v4 GH10 49 549 27 745 0.4758 0.6065
A0A9Q8PNJ5 GH4 8 543 14 866 0.4699 0.5983
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 22 554 21 506 0.7166 0.7982
A0A7U1BNH7 GH10 49 549 27 745 0.4758 0.6065
A0A9Q8PNJ5 GH4 8 543 14 866 0.4699 0.5983
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5g62-assembly2.cif.gz_B 52 556 1 491 0.9144 0.9786
5g5y-assembly1.cif.gz_A 49 558 1 494 0.8272 0.8922
6fth-assembly1.cif.gz_A 49 554 1 496 0.7988 0.8599
5xs8-assembly1.cif.gz_A 51 548 1 474 0.7966 0.8732
3omb-assembly1.cif.gz_A 31 553 1 503 0.7931 0.8486
4tqu-assembly1.cif.gz_Q 44 556 3 492 0.7889 0.8565
5h6u-assembly1.cif.gz_A 45 553 1 487 0.7848 0.8534
3vlw-assembly2.cif.gz_B 44 552 1 489 0.7827 0.8496
6jhx-assembly2.cif.gz_B 44 550 2 483 0.7816 0.8542
5suo-assembly1.cif.gz_A 51 553 1 451 0.6859 0.7754
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 17 558 17 538 0.8484 0.9026
AF-P37966-F1-model_v4 42 553 30 502 0.7104 0.807
AF-Q795R2-F1-model_v4 24 553 17 498 0.6503 0.7284
AF-Q8FVS7-F1-model_v4 49 543 22 411 0.639 0.7857
AF-Q578M8-F1-model_v4 49 543 22 411 0.6383 0.7848
AF-Q2YKZ9-F1-model_v4 49 543 22 411 0.638 0.7845
AF-A0A0H2UMY0-F1-model_v4 4 556 19 491 0.6251 0.709
AF-O32156-F1-model_v4 22 543 13 422 0.6129 0.732
AF-Q7LYW7-F1-model_v4 45 543 38 450 0.6116 0.7469
AF-O07009-F1-model_v4 39 543 28 420 0.6101 0.7538
Download Full SwissProt Results