PROTEIN: HRGMv2_2140_2_105
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Protein File & Metadata
Source:
HRGMv2_2140_2_105.pdb
Genome ID:
Protein ID:
HRGMv2_2140_2_105
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Protein Sequence
MSYIDTYKKY YQAIIQEHKA VFEKLDMEQL KGFVDLIVKS NKIFVHGAGR EGISLRGFAM 60 RLAHLGKPTY WLMDDTTIGM HEGDLLIISD GFGDVGIHRR IEERASKTGA KVAIITGLPE 120 GGNVKNFADF VLFIPAAVYM GKDREDPDAP RQHDVVPTIQ PMGNLYEQHL YLLMDIAAIL 180 IKDEMGLTYD DMEANHRNIE 200
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZMP8-F1-model_v4 | 3 | 200 | 1 | 187 | 0.8792 |
0.9268 |
| AF-Q2G0K6-F1-model_v4 | 20 | 200 | 1 | 167 | 0.866 |
0.9587 |
| AF-Q7XRX4-F1-model_v4 | 3 | 200 | 1 | 195 | 0.8509 |
0.8793 |
| AF-Q58644-F1-model_v4 | 1 | 200 | 1 | 180 | 0.8446 |
0.9075 |
| AF-I1LDT1-F1-model_v4 | 2 | 200 | 4 | 205 | 0.8312 |
0.8638 |
| AF-I1NGR9-F1-model_v4 | 2 | 200 | 4 | 204 | 0.8296 |
0.8611 |
| AF-Q9LTK1-F1-model_v4 | 2 | 200 | 4 | 208 | 0.8182 |
0.8583 |
| AF-K7TVP5-F1-model_v4 | 2 | 200 | 7 | 215 | 0.8162 |
0.8678 |
| AF-Q58731-F1-model_v4 | 5 | 187 | 1 | 187 | 0.7009 |
0.7627 |
| AF-A0A077ZBE4-F1-model_v4 | 1 | 200 | 46 | 233 | 0.6994 |
0.8245 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A416HLB9 | GH39 | 1 | 199 | 2 | 189 | 0.5168 |
0.853 |
| AF-A0A0K2GCS0-F1-model_v4 | GT4 | 1 | 187 | 447 | 639 | 0.4533 |
0.7539 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A416HLB9 | GH39 | 1 | 199 | 2 | 189 | 0.5168 |
0.853 |
| A0A9N7DIN9 | GH170 | 5 | 196 | 371 | 581 | 0.4825 |
0.7754 |
| A5FYE7 | CE9 | 1 | 197 | 467 | 676 | 0.4704 |
0.763 |
| A0A0K2GCS0 | GT4 | 1 | 187 | 447 | 639 | 0.4533 |
0.7539 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1m3s-assembly1.cif.gz_A | 1 | 200 | 1 | 181 | 0.873 |
0.9356 |
| 1m3s-assembly1.cif.gz_B | 1 | 200 | 1 | 183 | 0.8725 |
0.9286 |
| 1viv-assembly1.cif.gz_A | 3 | 199 | 1 | 184 | 0.8593 |
0.9146 |
| 1vim-assembly1.cif.gz_B | 3 | 200 | 1 | 186 | 0.8493 |
0.9046 |
| 1jeo-assembly1.cif.gz_A | 8 | 200 | 1 | 177 | 0.8369 |
0.9062 |
| 3fxa-assembly1.cif.gz_D | 1 | 198 | 3 | 191 | 0.7864 |
0.8387 |
| 5uqi-assembly1.cif.gz_A | 1 | 198 | 4 | 188 | 0.7838 |
0.8461 |
| 3etn-assembly1.cif.gz_C | 2 | 198 | 1 | 189 | 0.7737 |
0.8262 |
| 7en7-assembly1.cif.gz_A | 1 | 200 | 1 | 190 | 0.7724 |
0.8217 |
| 7en5-assembly1.cif.gz_A | 1 | 200 | 1 | 189 | 0.7694 |
0.8224 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42404-F1-model_v4 | 5 | 200 | 1 | 185 | 0.8922 |
0.9443 |
| AF-Q9LBW5-F1-model_v4 | 1 | 200 | 12 | 199 | 0.8634 |
0.9326 |
| AF-Q9S0X3-F1-model_v4 | 7 | 200 | 1 | 181 | 0.8632 |
0.9246 |
| AF-O28478-F1-model_v4 | 7 | 200 | 1 | 183 | 0.8513 |
0.9083 |
| AF-Q58644-F1-model_v4 | 1 | 200 | 1 | 180 | 0.8446 |
0.9075 |
| AF-O26351-F1-model_v4 | 2 | 200 | 2 | 197 | 0.8393 |
0.8699 |
| AF-Q9YAK0-F1-model_v4 | 2 | 200 | 9 | 211 | 0.8254 |
0.8681 |
| AF-A5UVV6-F1-model_v4 | 1 | 188 | 2 | 197 | 0.7164 |
0.7773 |
| AF-B3QL68-F1-model_v4 | 1 | 188 | 11 | 209 | 0.7076 |
0.7879 |
| AF-Q39X62-F1-model_v4 | 3 | 187 | 1 | 189 | 0.7066 |
0.7641 |