PROTEIN: HRGMv2_2122_16_6
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Protein File & Metadata
Source:
HRGMv2_2122_16_6.pdb
Genome ID:
Protein ID:
HRGMv2_2122_16_6
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Protein Sequence
MKKKLISTLL CVSMVAAMVA GCGSGDDTKD ANNDASNTEG TADADTDTDS GSDSTEVENT 60 ITGDPSADDA FVVWGWNDDI KNILDGPFAE QYPDLAKRIV FVNAGGSDYY QTKIDEILDD 120 PDNELYPDLM GLEVDYVLKY VNSDWLTSVG DCGITADDYA NQYQYNLDLG TVSGEDSSDA 180 NNVKALFWQA TPGCFQLRAD LCEKYLGTTD PAELSTMFST WDGILEAARK VNDASSGKCK 240 LFSGYDECFR VLSNSRATGW YGDDDVITVD DNMTEYMDLA KTMVDEGLTY ETDQWSTDWY 300 ANMEGDGETS NAAVAYCGCP WFTYWSLKDT WKGNTILVNA PEQFYWGGTG LAATVNCADK 360 EMAGTIIKAF TCDTDFMVSI NAKNSDFVNN KEAVKKISEA GATCDYLYEA AGQDIMAFYL 420 PMADSISAKN ATAEDQNINS AWSTQVKEYA AGNKDKDTAI ADFKSAVHDS YSYLKAE 477
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 1 | 473 | 33 | 439 | 0.7149 |
0.8136 |
| AF-K0F2E6-F1-model_v4 | 2 | 475 | 30 | 437 | 0.7043 |
0.8041 |
| AF-K0EWS9-F1-model_v4 | 68 | 474 | 52 | 463 | 0.7028 |
0.8203 |
| AF-Q9CCA3-F1-model_v4 | 62 | 475 | 25 | 465 | 0.68 |
0.7861 |
| AF-P9WGU9-F1-model_v4 | 66 | 475 | 30 | 465 | 0.6796 |
0.7921 |
| AF-Q8DRJ6-F1-model_v4 | 19 | 477 | 12 | 501 | 0.5604 |
0.6216 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 17 | 474 | 25 | 797 | 0.5536 |
0.7234 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Q2TKJ3 | GH49 | 17 | 474 | 25 | 797 | 0.5536 |
0.7234 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 68 | 472 | 1 | 393 | 0.7918 |
0.8816 |
| 8bfy-assembly1.cif.gz_A | 63 | 473 | 1 | 393 | 0.7575 |
0.8471 |
| 7c0x-assembly2.cif.gz_B | 61 | 473 | 6 | 395 | 0.7508 |
0.8455 |
| 7c0k-assembly1.cif.gz_A | 61 | 473 | 7 | 396 | 0.7496 |
0.8453 |
| 7c0o-assembly2.cif.gz_B | 61 | 474 | 7 | 397 | 0.7493 |
0.8441 |
| 7c0t-assembly2.cif.gz_B | 61 | 473 | 7 | 396 | 0.7492 |
0.8448 |
| 7c15-assembly2.cif.gz_B | 61 | 473 | 6 | 394 | 0.749 |
0.8445 |
| 7c0s-assembly1.cif.gz_A | 61 | 473 | 7 | 396 | 0.749 |
0.8447 |
| 7c0u-assembly2.cif.gz_B | 61 | 473 | 8 | 397 | 0.7486 |
0.8451 |
| 7c0w-assembly1.cif.gz_A | 61 | 473 | 7 | 396 | 0.7485 |
0.8441 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P94528-F1-model_v4 | 63 | 472 | 28 | 433 | 0.7468 |
0.8453 |
| AF-Q7LYW7-F1-model_v4 | 68 | 475 | 44 | 450 | 0.693 |
0.7998 |
| AF-P9WGU8-F1-model_v4 | 65 | 474 | 29 | 464 | 0.68 |
0.793 |
| AF-P9WGU9-F1-model_v4 | 66 | 475 | 30 | 465 | 0.6796 |
0.7921 |
| AF-O58969-F1-model_v4 | 67 | 475 | 40 | 434 | 0.6605 |
0.7765 |
| AF-D4GP35-F1-model_v4 | 38 | 475 | 21 | 459 | 0.6525 |
0.7109 |
| AF-P58300-F1-model_v4 | 68 | 474 | 58 | 434 | 0.6474 |
0.7889 |
| AF-Q9V297-F1-model_v4 | 67 | 474 | 76 | 453 | 0.6352 |
0.787 |