PROTEIN: HRGMv2_2121_12_11
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Protein File & Metadata
Source:
HRGMv2_2121_12_11.pdb
Genome ID:
Protein ID:
HRGMv2_2121_12_11
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Detailed structural information will appear here after analysis...
Protein Sequence
MSVKRTELEI IDLDRYVLFA RPCVDINEDA VRELADRADK EGLDFIGIVH GHVDTLDHVE 60 YDVQTDLSEN PIMSIMIRNI CAGVYSKTFL ENNHIELRMN KDTIFPDLDI LWQTFVFSHK 120 ALFLNSDVCD NVGLDTVWMD ETGPAFDVNR RFDYIRDILM KDWNLWNKWK YYFSLQRFRC 180 YFEMIHWMTE DVGWIFAERM AVDFHRSIEL EEVDETLFYP EEQTALHVLA EDAGFVKRFY 240 LGKIIYSKQV FDIRGELDRS SRRVQELENE IREKNEDIRI QGLHLEEQRR ESEQNMELLR 300 QSYDKELQDQ KEMYEHSTTF RVGKAVMVIP ITAKRFVKRI MRRLKKS 347
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P8I0-F1-model_v4 | 3 | 253 | 16 | 405 | 0.541 |
0.8315 |
| AF-A0A0H3GV76-F1-model_v4 | 3 | 247 | 17 | 334 | 0.5249 |
0.8175 |
| AF-Q0P8H6-F1-model_v4 | 3 | 260 | 16 | 601 | 0.4377 |
0.7972 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0U3BMN5-F1-model_v4 | GT2 | 30 | 250 | 1 | 234 | 0.6405 |
0.838 |
| A0A892ZHL1 | GT2 | 5 | 244 | 66 | 322 | 0.6196 |
0.863 |
| A0A172RXC0 | GT2 | 3 | 247 | 15 | 329 | 0.6147 |
0.8468 |
| AF-A0A1U9JWX1-F1-model_v4 | GT2 | 3 | 246 | 12 | 320 | 0.6134 |
0.8371 |
| AF-A0A0U3C2H7-F1-model_v4 | GT2 | 5 | 250 | 44 | 308 | 0.6119 |
0.8263 |
| A5ZUY3 | GT2 | 3 | 252 | 11 | 336 | 0.6046 |
0.8583 |
| BDF49288.1 | GT2 | 3 | 244 | 20 | 331 | 0.6034 |
0.8432 |
| AF-D5HHY1-F1-model_v4 | GT2 | 3 | 257 | 11 | 342 | 0.6004 |
0.8524 |
| AF-A0A6L7IXX3-F1-model_v4 | GT2 | 4 | 251 | 11 | 328 | 0.5998 |
0.836 |
| AF-A0A0S2CGX8-F1-model_v4 | GT2 | 4 | 250 | 18 | 337 | 0.5993 |
0.8313 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A892ZHL1 | GT2 | 5 | 244 | 66 | 322 | 0.6196 |
0.863 |
| A0A172RXC0 | GT2 | 3 | 247 | 15 | 329 | 0.6147 |
0.8468 |
| A0A1U9JWX1 | GT2 | 3 | 246 | 12 | 320 | 0.6134 |
0.8371 |
| A5ZUY3 | GT2 | 3 | 252 | 11 | 336 | 0.6046 |
0.8583 |
| BDF49288.1 | GT2 | 3 | 244 | 20 | 331 | 0.6034 |
0.8432 |
| A0A6L7IXX3 | GT2 | 4 | 251 | 11 | 328 | 0.5998 |
0.836 |
| B0ZTM7 | GT2 | 3 | 247 | 16 | 333 | 0.5907 |
0.8358 |
| A0A975XQ09 | GT2 | 3 | 243 | 12 | 324 | 0.5822 |
0.8564 |
| A0A6M8IVR5 | GT2 | 3 | 246 | 29 | 342 | 0.5816 |
0.8475 |
| A0A173X230 | GT2 | 3 | 247 | 11 | 328 | 0.5803 |
0.8524 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.