PROTEIN: HRGMv2_2094_57_11
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Protein File & Metadata
Source:
HRGMv2_2094_57_11.pdb
Genome ID:
Protein ID:
HRGMv2_2094_57_11
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Protein Sequence
MSQTDRRERR LQSYKEIRSE KEVYIQVLAP AVYEFVLWVL REAEQSGKRR LYFLARDGYQ 60 MYLTAQYLCK LYQLDIECRY LKISRYAVRV PEYHLLGEKC LDRICVGGID VTFEKIMQRA 120 ALTQEEGEAI AALSGYLEDY RKVINYHEVM QLKEKLRQIP LLFHYIEQHS KEASQTTIGY 180 LEQEGLLESV PYALVDSGWI GTIQQSIKHL LWKNQPGREL EGYYFGLYEI PQGEMKEYYH 240 SFYFSPWGEI RRKVHFSNSL FEAVFSAPEG MIVSYAMQND NGNVTYVPVA DSRENLNQER 300 IRQYICWLEE FLKHQGMQIK TGGNPDSSFS EKSTDSSLSE KLTEQNWKKL PEPDGKLVEQ 360 LLSKFMGNPT VFEAEAYGSL LFSDDVKEEN HQSVSAQFSE QEIRNHHFFN RLLIMTGIRK 420 TVLHESAWIE GSIVSCKTLD EKGRAKNRRH AVFYKYVIYL RKWLKQNMIH GR 472
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 1 | 446 | 12 | 631 | 0.6523 |
0.7952 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 1 | 464 | 415 | 1067 | 0.5582 |
0.7891 |
| AF-W0DNV7-F1-model_v4 | GT2 | 1 | 465 | 433 | 1091 | 0.5577 |
0.792 |
| A0A1I7GMF6 | GT2 | 1 | 460 | 431 | 1083 | 0.5545 |
0.7937 |
| A0A974WXG9 | GT4 | 1 | 454 | 458 | 1078 | 0.5481 |
0.7981 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 17 | 454 | 10 | 403 | 0.5473 |
0.7651 |
| A0A9J7AXY3 | GT2 | 17 | 472 | 8 | 504 | 0.5328 |
0.6849 |
| V4JBH5 | GT2 | 17 | 457 | 4 | 398 | 0.5318 |
0.7887 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 16 | 457 | 10 | 405 | 0.5257 |
0.7873 |
| AF-M4S1R1-F1-model_v4 | GT4 | 1 | 453 | 5 | 699 | 0.5139 |
0.7377 |
| QRK05458.1 | GT4 | 1 | 472 | 26 | 992 | 0.5137 |
0.7369 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 1 | 464 | 415 | 1067 | 0.5582 |
0.7891 |
| A0A1I7GMF6 | GT2 | 1 | 460 | 431 | 1083 | 0.5545 |
0.7937 |
| A0A974WXG9 | GT4 | 1 | 454 | 458 | 1078 | 0.5481 |
0.7981 |
| A0A0U5F758 | GT2 | 17 | 454 | 10 | 403 | 0.5473 |
0.7651 |
| A0A9J7AXY3 | GT2 | 17 | 472 | 8 | 504 | 0.5328 |
0.6849 |
| V4JBH5 | GT2 | 17 | 457 | 4 | 398 | 0.5318 |
0.7887 |
| A0A0H3KC95 | GT2 | 16 | 457 | 10 | 405 | 0.5257 |
0.7873 |
| M4S1R1 | GT4 | 1 | 453 | 5 | 699 | 0.5139 |
0.7377 |
| QRK05458.1 | GT4 | 1 | 472 | 26 | 992 | 0.5137 |
0.7369 |
| A6M2M4 | GT2 | 1 | 468 | 35 | 917 | 0.4981 |
0.7477 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 1 | 380 | 234 | 591 | 0.5656 |
0.8217 |
| 8a0m-assembly1.cif.gz_B | 1 | 453 | 268 | 876 | 0.5215 |
0.7302 |
| 8a0m-assembly2.cif.gz_C | 1 | 453 | 402 | 1024 | 0.5169 |
0.7561 |
| 8a0m-assembly1.cif.gz_A | 1 | 453 | 401 | 1023 | 0.5164 |
0.7552 |
| 8a0c-assembly1.cif.gz_A | 1 | 453 | 406 | 1028 | 0.5164 |
0.7561 |
| 8a0c-assembly1.cif.gz_B | 1 | 453 | 406 | 1025 | 0.5086 |
0.7442 |
| 8a0m-assembly2.cif.gz_D | 1 | 453 | 297 | 887 | 0.491 |
0.6899 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.