dbCAN Logo

PROTEIN: HRGMv2_2087_4_89

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_2087_4_89.pdb
Genome ID:
HRGMv2_2087
Protein ID:
HRGMv2_2087_4_89

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MRKKSWKQVA   AIVICAALLS   GCTGENGQEK   NTGRKEGQVV   NIYCWNDEFK   EIYDKYASDL 60
AKKHDVEVNL   VIISSDNNAY   QINLDEALKE   QNTCIDDDKV   DLFLIEADYA   SKYVKSDNSI 120
DVKKTVGLTD   EDLKQQYDYT   KKIVSENGIQ   KGVTWQATPG   LFAYRRSIAK   KVLGTDDPDQ 180
VQKQLKDWDK   FDQVAQKMNA   AGYKMLSGYD   DSYRAFSNNV   SHPWVVDNKI   VIDENIKKWI 240
RQTKEYAQKD   YNNHTTLWSP   QWTQDQGPDG   NVFGFFYSTW   GINFTLMGNA   LADSSKPAEK 300
GNGIYGDYAV   CEGPQAYYWG   GTWMCAAQGT   DNIPFIRDLM   KRLTCDTKTM   KQITLDTQDY 360
TNNEKAMDEI   AKSDYQSDFL   GGQNHIALFA   EAAKKIDMSN   ISDYDKDCNE   QIQQCLHPYF 420
EGKISLAQGM   DDFYKKMEQL   HPELSH 446
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0EWS5-F1-model_v4 33 446 23 454 0.7328 0.8133
AF-K0F002-F1-model_v4 35 443 45 439 0.7278 0.8267
AF-P71619-F1-model_v4 35 445 34 428 0.7214 0.8186
AF-K0F2E6-F1-model_v4 35 445 41 436 0.7213 0.8213
AF-P76042-F1-model_v4 34 444 25 430 0.7191 0.7917
AF-Q8DNN7-F1-model_v4 14 444 27 434 0.7182 0.793
AF-O53485-F1-model_v4 10 445 24 439 0.717 0.7804
AF-A0A133CPC5-F1-model_v4 33 444 29 423 0.7156 0.8017
AF-A0A133CKQ7-F1-model_v4 25 445 25 419 0.7146 0.7973
AF-K0F8J3-F1-model_v4 14 445 21 436 0.7137 0.7757
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 33 445 30 416 0.6831 0.7763
AF-K8E205-F1-model_v4 GH32 31 424 29 344 0.6366 0.7922
A0A9Q8PNJ5 GH4 1 444 257 866 0.5851 0.7799
AF-A0A7U1BNH7-F1-model_v4 GH10 31 446 24 734 0.5545 0.7451
UJP10085.1 GH154 21 424 497 1168 0.4124 0.6886
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 33 445 30 416 0.6831 0.7763
K8E205 GH32 31 424 29 344 0.6366 0.7922
A0A0M1Q963 GH43_11 35 446 39 495 0.6098 0.7148
A0A9Q8PNJ5 GH4 1 444 257 866 0.5851 0.7799
A0A1Q2TKJ3 GH49 1 445 49 797 0.5569 0.7214
A0A7U1BNH7 GH10 31 446 24 734 0.5545 0.7451
UJP10085.1 GH154 21 424 497 1168 0.4124 0.6886
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5ixp-assembly1.cif.gz_A 35 442 1 393 0.8306 0.8965
3uor-assembly2.cif.gz_B 38 445 1 388 0.7779 0.8551
6x84-assembly2.cif.gz_B 35 445 1 411 0.7603 0.811
4rk2-assembly1.cif.gz_A 34 442 1 393 0.7569 0.8227
7c6z-assembly1.cif.gz_A 38 445 1 415 0.7524 0.8103
4mfi-assembly1.cif.gz_A 35 444 4 397 0.7498 0.8223
6dtr-assembly1.cif.gz_A 35 445 1 393 0.7484 0.8138
7c6x-assembly7.cif.gz_G 39 445 1 414 0.7484 0.8088
7c71-assembly2.cif.gz_B 38 445 1 415 0.748 0.8058
7bvt-assembly1.cif.gz_A 35 444 1 391 0.7477 0.8144
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P29822-F1-model_v4 31 442 22 422 0.7753 0.852
AF-P94528-F1-model_v4 27 443 23 433 0.7721 0.8391
AF-Q9KEE7-F1-model_v4 7 444 27 445 0.7456 0.8093
AF-Q9K491-F1-model_v4 35 444 37 424 0.7304 0.832
AF-Q8FVS7-F1-model_v4 31 444 19 411 0.7222 0.8037
AF-Q578M8-F1-model_v4 31 444 19 411 0.7216 0.803
AF-Q2YKZ9-F1-model_v4 31 444 19 411 0.7195 0.8009
AF-P76042-F1-model_v4 34 444 25 430 0.7191 0.7917
AF-Q53684-F1-model_v4 33 444 24 423 0.7101 0.8089
AF-O06989-F1-model_v4 21 445 20 415 0.7097 0.7891
Download Full SwissProt Results