PROTEIN: HRGMv2_2087_4_85
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Protein File & Metadata
Source:
HRGMv2_2087_4_85.pdb
Genome ID:
Protein ID:
HRGMv2_2087_4_85
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Protein Sequence
MKKKAVSALL CAAMVAGMLA GCGKGSDSGT PSDTSKGDAS NATESASSNL KDDGKVLNIY 60 CWNEEFKSRI TAHYPDYKEV DATHGKIGDV DVVWNITPSD DNAYQNNLDA ALLNQQDAPA 120 DDKIDIFLVE ADNALKYVDT DYTAPVKDLG ITDADLSKQY QYTKDIVTDS KGVLKGVSWQ 180 GCPGVLFYNR EAAKDVLGTD DPDEVQNYVC DWDTFNDTAA KMQAKGYKMI SSVNDTYRVY 240 SNNVSSKWVE DGKVQVDDNI MKWVDDSKKL VDAKEAGTFD MWSDDWSKGF YPDGKVFCYF 300 GPAWLVNFSM AADTEGSIGY NGGWGAAQGP QGFFWGGTWI CAAQDTDNAS LVKDIMLKMT 360 TDDDVMKDIV LDDDDFVNNN TVMNGLADGS IKAKDGKEYS SKILGGQNPL SMYCAGVETL 420 DLSNISAYDQ GCNEEFQKAM KNYFEGKATK DEALELFYKG VTEKYPELTY 470
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 46 | 468 | 39 | 439 | 0.7197 |
0.8251 |
| AF-A0A133CPC5-F1-model_v4 | 52 | 469 | 33 | 423 | 0.7093 |
0.8191 |
| AF-K0F2E6-F1-model_v4 | 14 | 469 | 29 | 436 | 0.7023 |
0.7967 |
| AF-P71619-F1-model_v4 | 49 | 469 | 31 | 428 | 0.7017 |
0.8095 |
| AF-Q8DNN7-F1-model_v4 | 53 | 469 | 33 | 436 | 0.699 |
0.7958 |
| AF-A0A133CDW9-F1-model_v4 | 1 | 469 | 6 | 443 | 0.6805 |
0.7277 |
| AF-Q9I6J1-F1-model_v4 | 52 | 445 | 24 | 367 | 0.5988 |
0.7305 |
| AF-Q8DRJ6-F1-model_v4 | 54 | 470 | 62 | 499 | 0.5374 |
0.6431 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 468 | 202 | 866 | 0.5409 |
0.7081 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 468 | 202 | 866 | 0.5409 |
0.7081 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 53 | 466 | 1 | 393 | 0.7961 |
0.8807 |
| 8bfy-assembly1.cif.gz_A | 55 | 467 | 2 | 393 | 0.7542 |
0.8402 |
| 3uor-assembly2.cif.gz_B | 54 | 469 | 1 | 388 | 0.7428 |
0.836 |
| 6x84-assembly2.cif.gz_B | 53 | 469 | 1 | 411 | 0.7386 |
0.8066 |
| 7c0k-assembly1.cif.gz_A | 54 | 468 | 15 | 396 | 0.7376 |
0.8425 |
| 7vfq-assembly1.cif.gz_A | 54 | 470 | 1 | 394 | 0.7375 |
0.819 |
| 7c0x-assembly2.cif.gz_B | 54 | 468 | 14 | 395 | 0.7373 |
0.8413 |
| 7vfq-assembly2.cif.gz_B | 54 | 470 | 1 | 396 | 0.7366 |
0.8161 |
| 7c0t-assembly2.cif.gz_B | 54 | 468 | 15 | 396 | 0.7359 |
0.8408 |
| 7c0o-assembly2.cif.gz_B | 54 | 468 | 15 | 397 | 0.7358 |
0.8397 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 52 | 467 | 26 | 422 | 0.7465 |
0.8469 |
| AF-Q9KEE7-F1-model_v4 | 10 | 469 | 27 | 445 | 0.7298 |
0.8082 |
| AF-O32156-F1-model_v4 | 49 | 469 | 22 | 422 | 0.6884 |
0.778 |
| AF-Q7LYW7-F1-model_v4 | 52 | 469 | 42 | 450 | 0.682 |
0.7794 |
| AF-O06989-F1-model_v4 | 53 | 469 | 34 | 416 | 0.672 |
0.7872 |
| AF-O31518-F1-model_v4 | 52 | 468 | 31 | 427 | 0.6705 |
0.7706 |
| AF-O58758-F1-model_v4 | 53 | 469 | 45 | 420 | 0.6487 |
0.7761 |
| AF-Q92KZ7-F1-model_v4 | 52 | 470 | 21 | 414 | 0.6485 |
0.7401 |
| AF-O06875-F1-model_v4 | 52 | 470 | 28 | 421 | 0.6444 |
0.7409 |
| AF-Q8YCE2-F1-model_v4 | 52 | 470 | 28 | 421 | 0.6442 |
0.7406 |