PROTEIN: HRGMv2_2087_14_25
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2087_14_25.pdb
Genome ID:
Protein ID:
HRGMv2_2087_14_25
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKHQATIQPR METYRTLLKQ NTFLSGAAEE CLKQLCAPED QIYVTLWAPA LVQYVAWVLE 60 EAQKNRQKRL YFLARDAYPM YLVAKKMVEY LHIPIEICYL RVSRYALRIP EYHLLGDACL 120 DRIFLSGIDI SFYQILNRAA LSEEEMIAVC REINYQRSLH ATLNRKEIFN LRERVKKCCA 180 EGTTHLLEKI YEKSDAAYET TIGYLRQEGL LDNVRYAIVD SGWVGTIQKS LQTLLAQEKP 240 GITLTGYYFG LYEYPVNRNN CRYEAYYFMP KGNVRKKAGF SNCLFEVMYS EPCPMIKAYC 300 CEAGRYIPVF SQVENPNTEQ LKRNNELLRM FMDHLSKQPE HKAAMLCQKD IAGKLYETIM 360 SRPNRWEAKY YGMQLFSDDL SDEHMRCIAN RLTQREIKDL RILSKLCIML GLSKKVIHES 420 GWIEGTIVNA GKHISSNLRS ARMAKYVTHL RQSLKAK 457
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 15 | 436 | 207 | 628 | 0.6537 |
0.8252 |
| AF-Q0P8I2-F1-model_v4 | 1 | 447 | 62 | 975 | 0.4776 |
0.6782 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 16 | 454 | 631 | 1067 | 0.5746 |
0.8415 |
| AF-W0DNV7-F1-model_v4 | GT2 | 16 | 455 | 649 | 1091 | 0.5744 |
0.8412 |
| A0A974WXG9 | GT4 | 1 | 444 | 131 | 1078 | 0.572 |
0.8334 |
| A0A1I7GMF6 | GT2 | 16 | 450 | 646 | 1083 | 0.5717 |
0.8451 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 1 | 447 | 1 | 403 | 0.5578 |
0.7515 |
| V4JBH5 | GT2 | 6 | 447 | 1 | 398 | 0.5423 |
0.7844 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 30 | 447 | 4 | 405 | 0.536 |
0.7778 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 448 | 125 | 970 | 0.5322 |
0.7545 |
| AF-U5MZQ8-F1-model_v4 | GT2 | 1 | 445 | 126 | 966 | 0.5282 |
0.7535 |
| U5MZQ8 | GT2 | 1 | 445 | 126 | 966 | 0.5282 |
0.7535 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 16 | 454 | 631 | 1067 | 0.5746 |
0.8415 |
| A0A974WXG9 | GT4 | 1 | 444 | 131 | 1078 | 0.572 |
0.8334 |
| A0A1I7GMF6 | GT2 | 16 | 450 | 646 | 1083 | 0.5717 |
0.8451 |
| A0A0U5F758 | GT2 | 1 | 447 | 1 | 403 | 0.5578 |
0.7515 |
| A0A9J7AXY3 | GT2 | 6 | 454 | 3 | 400 | 0.5463 |
0.7796 |
| V4JBH5 | GT2 | 6 | 447 | 1 | 398 | 0.5423 |
0.7844 |
| A0A0H3KC95 | GT2 | 30 | 447 | 4 | 405 | 0.536 |
0.7778 |
| U5MZQ8 | GT2 | 1 | 445 | 126 | 966 | 0.5282 |
0.7535 |
| QRK05458.1 | GT4 | 17 | 457 | 249 | 988 | 0.527 |
0.7884 |
| A0A0U3BMS4 | GT111 | 1 | 417 | 106 | 927 | 0.5245 |
0.7781 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 19 | 374 | 241 | 591 | 0.5676 |
0.8255 |
| 8a0m-assembly1.cif.gz_B | 10 | 442 | 459 | 875 | 0.539 |
0.7993 |
| 8a0m-assembly2.cif.gz_C | 10 | 443 | 593 | 1024 | 0.5338 |
0.7997 |
| 8a0m-assembly1.cif.gz_A | 10 | 443 | 592 | 1023 | 0.533 |
0.7983 |
| 8a0c-assembly1.cif.gz_A | 10 | 444 | 597 | 1027 | 0.5329 |
0.7998 |
| 8a0c-assembly1.cif.gz_B | 10 | 442 | 597 | 1024 | 0.5255 |
0.794 |
| 8a0m-assembly2.cif.gz_D | 10 | 442 | 488 | 886 | 0.5085 |
0.7871 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.