PROTEIN: HRGMv2_2087_12_77
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Protein File & Metadata
Source:
HRGMv2_2087_12_77.pdb
Genome ID:
Protein ID:
HRGMv2_2087_12_77
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Protein Sequence
MKKVFKKTSV KNLSPYYQFG IDYFGPFLYG FTKWLYTSLK KAQIHRVYFF SRDGYMMDLA 60 FQQLGYDAEF DTQYVHFSRK SLRQALLCTT SGYQDSLQYL GWEKYVTLSK LLEYYGYDAT 120 ERKHLAELHK WELSKDYAYD GLKNNKEVEQ IYICLKEQIY EKSQQQRQLL LAYIEQIGMK 180 GSCAIVDIGW HGSMQYCLEQ IAKYNGLDLK IYGYYIGISP QFPICGFCSG YLYNPQNLKQ 240 RKSVLCSLGI MERMLQSTEG STDSYRQVGD KIWPVYAHYE YEEEQKLVCC IKEWQQGALD 300 YIEQKKNYLK EDEDYVKFAQ PLIAIGKNPT LKMVKLFSFF YNTDGEKEYY VSQKKLVQYK 360 PRELMHALSN SVWKTGFLKS VFKIPFPYFY IYRIFRK 397
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 9 | 387 | 236 | 628 | 0.661 |
0.8543 |
| AF-Q0P8I2-F1-model_v4 | 8 | 396 | 32 | 975 | 0.4639 |
0.6858 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0U5F758-F1-model_v4 | GT2 | 12 | 395 | 9 | 640 | 0.5927 |
0.7752 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 9 | 397 | 648 | 1066 | 0.5909 |
0.8816 |
| AF-W0DNV7-F1-model_v4 | GT2 | 7 | 397 | 666 | 1088 | 0.5906 |
0.8825 |
| A0A1I7GMF6 | GT2 | 9 | 397 | 666 | 1083 | 0.5867 |
0.8789 |
| V4JBH5 | GT2 | 12 | 397 | 3 | 397 | 0.5817 |
0.7991 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 6 | 395 | 1 | 403 | 0.5766 |
0.7955 |
| A0A9J7AXY3 | GT2 | 12 | 397 | 7 | 395 | 0.5748 |
0.7814 |
| A0A974WXG9 | GT4 | 9 | 395 | 671 | 1078 | 0.5597 |
0.8459 |
| AF-W8KPG0-F1-model_v4 | GT2 | 13 | 397 | 8 | 397 | 0.5566 |
0.7877 |
| QRK05458.1 | GT4 | 9 | 397 | 265 | 812 | 0.5556 |
0.852 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0U5F758 | GT2 | 12 | 395 | 9 | 640 | 0.5927 |
0.7752 |
| A0A2I6S8V6 | GT2 | 9 | 397 | 648 | 1066 | 0.5909 |
0.8816 |
| A0A1I7GMF6 | GT2 | 9 | 397 | 666 | 1083 | 0.5867 |
0.8789 |
| V4JBH5 | GT2 | 12 | 397 | 3 | 397 | 0.5817 |
0.7991 |
| A0A0H3KC95 | GT2 | 6 | 395 | 1 | 403 | 0.5766 |
0.7955 |
| A0A9J7AXY3 | GT2 | 12 | 397 | 7 | 395 | 0.5748 |
0.7814 |
| A0A974WXG9 | GT4 | 9 | 395 | 671 | 1078 | 0.5597 |
0.8459 |
| W8KPG0 | GT2 | 13 | 397 | 8 | 397 | 0.5566 |
0.7877 |
| QRK05458.1 | GT4 | 9 | 397 | 265 | 812 | 0.5556 |
0.852 |
| M4S1R1 | GT4 | 10 | 394 | 232 | 725 | 0.5423 |
0.8118 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 13 | 340 | 252 | 591 | 0.601 |
0.8674 |
| 8a0m-assembly1.cif.gz_B | 9 | 393 | 496 | 875 | 0.5292 |
0.7837 |
| 8a0c-assembly1.cif.gz_A | 9 | 393 | 634 | 1027 | 0.5188 |
0.7901 |
| 8a0m-assembly2.cif.gz_C | 9 | 393 | 627 | 1023 | 0.5175 |
0.7878 |
| 8a0m-assembly1.cif.gz_A | 9 | 393 | 626 | 1022 | 0.5171 |
0.7869 |
| 8a0c-assembly1.cif.gz_B | 9 | 392 | 634 | 1025 | 0.5148 |
0.7854 |
| 8a0m-assembly2.cif.gz_D | 9 | 393 | 525 | 886 | 0.5055 |
0.7842 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.