PROTEIN: HRGMv2_2087_12_4
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Protein File & Metadata
Source:
HRGMv2_2087_12_4.pdb
Genome ID:
Protein ID:
HRGMv2_2087_12_4
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Protein Sequence
MKKKVVSALL CATMVATMFA GCGSKESSDN ATTPDTSKAD TSSEVTAPAE DTGKVLNIYC 60 WNEEFKSRIT AHYPDYQEVD ATHGKIGDVD VVWNITPNDD NAYQNNLDAT LLNQADAPAD 120 DKIDLFLVEA DYALKYVDTD YTMPIKDLGI ADSDLSKQYQ YTKDIVTDSK GVLKGLSWQG 180 CPGVLFYNRD AAKEVLGTDD PDKVQEYVKD WDTYNDTAKK MKDAGYKMTA SANDTYRVYS 240 NNVTSKWVDG NKINIDDNIM KWVDDSKAQV DAGETGTCDL WSDDWSKGFY PQGKVFCYFG 300 PAWLVNFSMA ADTEGSIGYN GGWGAAQGPQ GFFWGGTWIC AAQGTDNANL VKDIMLKMTT 360 DDDIMKDIVV DDDDFVNNST VMNGLADGSI KVKDDKEYTS KILGGQNPLP MYCAGVETLD 420 LSNLSSYDQG CNEEFQNAMK NYFEGKASKE EALDLFYKAV TEKYPELTY 469
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 17 | 467 | 33 | 439 | 0.7143 |
0.8076 |
| AF-A0A133CPC5-F1-model_v4 | 50 | 468 | 32 | 423 | 0.7099 |
0.8168 |
| AF-K0EWS9-F1-model_v4 | 43 | 468 | 40 | 463 | 0.706 |
0.7892 |
| AF-A0A132Z3C8-F1-model_v4 | 53 | 467 | 33 | 428 | 0.7016 |
0.8064 |
| AF-K0F2E6-F1-model_v4 | 13 | 468 | 29 | 436 | 0.6998 |
0.7933 |
| AF-P71619-F1-model_v4 | 49 | 468 | 32 | 428 | 0.6978 |
0.8063 |
| AF-Q8DNN7-F1-model_v4 | 52 | 467 | 33 | 435 | 0.6974 |
0.7953 |
| AF-Q9I6J1-F1-model_v4 | 52 | 444 | 25 | 367 | 0.6019 |
0.736 |
| AF-Q8DRJ6-F1-model_v4 | 53 | 469 | 62 | 499 | 0.5382 |
0.6433 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 468 | 203 | 866 | 0.5379 |
0.7035 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7U1BNH7 | GH10 | 51 | 469 | 28 | 734 | 0.5412 |
0.7423 |
| A0A9Q8PNJ5 | GH4 | 1 | 468 | 203 | 866 | 0.5379 |
0.7035 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 51 | 466 | 1 | 393 | 0.7944 |
0.8782 |
| 8bfy-assembly1.cif.gz_A | 53 | 466 | 1 | 393 | 0.7574 |
0.8411 |
| 3uor-assembly2.cif.gz_B | 51 | 468 | 1 | 388 | 0.7402 |
0.8326 |
| 7c0k-assembly1.cif.gz_A | 52 | 467 | 14 | 396 | 0.7396 |
0.842 |
| 7c0x-assembly2.cif.gz_B | 52 | 467 | 13 | 395 | 0.7391 |
0.8404 |
| 7vfq-assembly1.cif.gz_A | 53 | 469 | 1 | 394 | 0.7376 |
0.8184 |
| 7c0o-assembly2.cif.gz_B | 52 | 467 | 14 | 397 | 0.7375 |
0.8382 |
| 7c0t-assembly2.cif.gz_B | 52 | 467 | 14 | 396 | 0.7375 |
0.8392 |
| 7c0s-assembly1.cif.gz_A | 52 | 467 | 14 | 396 | 0.7373 |
0.839 |
| 6x84-assembly2.cif.gz_B | 52 | 468 | 1 | 411 | 0.7371 |
0.8045 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 51 | 466 | 26 | 422 | 0.7439 |
0.844 |
| AF-Q9KEE7-F1-model_v4 | 10 | 468 | 27 | 445 | 0.7304 |
0.8083 |
| AF-Q2YKZ9-F1-model_v4 | 51 | 468 | 23 | 411 | 0.7085 |
0.8117 |
| AF-O32156-F1-model_v4 | 49 | 468 | 24 | 422 | 0.6904 |
0.7823 |
| AF-Q7LYW7-F1-model_v4 | 50 | 468 | 41 | 449 | 0.6827 |
0.7802 |
| AF-O31518-F1-model_v4 | 48 | 467 | 30 | 427 | 0.6701 |
0.7678 |
| AF-O58758-F1-model_v4 | 51 | 468 | 44 | 420 | 0.651 |
0.7758 |
| AF-Q92KZ7-F1-model_v4 | 51 | 469 | 21 | 414 | 0.651 |
0.7425 |
| AF-O06875-F1-model_v4 | 51 | 469 | 28 | 421 | 0.6468 |
0.7432 |
| AF-Q8YCE2-F1-model_v4 | 51 | 469 | 28 | 421 | 0.6467 |
0.7431 |