PROTEIN: HRGMv2_2075_26_23
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Protein File & Metadata
Source:
HRGMv2_2075_26_23.pdb
Genome ID:
Protein ID:
HRGMv2_2075_26_23
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Protein Sequence
MKKKVLSALL TTAMLASMLV GCGSNNDAPA AASSEAAPAA STEAAASTEV ASTEAATEEG 60 KVFNIYCWNE EFKSRLTDHY PGYEEVDGTT GKIGDITVKW NITPSDDNAY QNNLDATLLK 120 QADAAADDKI DLFLVEADYA LKYVDTDYTM PVKDLGITDA DLANQYQYTK DVVTDSNGNL 180 KGVSWQGCPG VLIYNREAAK AVLGTDDPAE VQKSVSDWDT FTATAEKMKA AGYNMVSSVN 240 DTYRVYSNNV SGKWVQDGKI VIDDNLMKWV DDSKKMVDAK ETGTFDLWSD DWSKGFYPDG 300 KVFCYFGPAW LINFSMAADT DGSIANQGGW GATEGPQGFF WGGTWICGAT GTDNASLVKD 360 IILKMTTDED IMKEIVVADD DFVNNKPAME AMAADTSYQS KVLGGQNPLA MFCAGAEKID 420 LSNLSAYDQG CNEEFQHAMK NYFDGKASLD DALNLFYKAV EEKYPELTH 469
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 16 | 467 | 31 | 439 | 0.7195 |
0.8092 |
| AF-A0A133CPC5-F1-model_v4 | 55 | 467 | 30 | 423 | 0.7148 |
0.8192 |
| AF-K0F2E6-F1-model_v4 | 14 | 468 | 28 | 436 | 0.7 |
0.792 |
| AF-Q8DRJ6-F1-model_v4 | 59 | 469 | 61 | 499 | 0.5436 |
0.6561 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 467 | 219 | 866 | 0.5407 |
0.7084 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 467 | 219 | 866 | 0.5407 |
0.7084 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 58 | 465 | 1 | 393 | 0.7951 |
0.8792 |
| 8bfy-assembly1.cif.gz_A | 60 | 466 | 1 | 393 | 0.7571 |
0.8408 |
| 3uor-assembly2.cif.gz_B | 59 | 468 | 1 | 388 | 0.7402 |
0.8328 |
| 7vfq-assembly1.cif.gz_A | 59 | 469 | 1 | 394 | 0.7396 |
0.8204 |
| 7c0k-assembly1.cif.gz_A | 59 | 467 | 14 | 396 | 0.7393 |
0.8417 |
| 7c0x-assembly2.cif.gz_B | 59 | 467 | 13 | 395 | 0.7391 |
0.8405 |
| 2z8d-assembly2.cif.gz_B | 55 | 469 | 1 | 399 | 0.739 |
0.8156 |
| 7vfq-assembly2.cif.gz_B | 59 | 469 | 1 | 396 | 0.7384 |
0.8171 |
| 2z8d-assembly1.cif.gz_A | 56 | 469 | 1 | 401 | 0.7384 |
0.8133 |
| 6x84-assembly2.cif.gz_B | 58 | 468 | 1 | 411 | 0.7383 |
0.8053 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 58 | 465 | 26 | 422 | 0.7467 |
0.8463 |
| AF-Q8YCA7-F1-model_v4 | 58 | 468 | 24 | 433 | 0.6969 |
0.7797 |
| AF-O31518-F1-model_v4 | 44 | 467 | 20 | 427 | 0.6907 |
0.7743 |
| AF-P58300-F1-model_v4 | 59 | 467 | 57 | 434 | 0.6426 |
0.7758 |
| AF-D4GP35-F1-model_v4 | 55 | 469 | 64 | 459 | 0.6404 |
0.7602 |
| AF-Q9V297-F1-model_v4 | 57 | 467 | 74 | 453 | 0.6324 |
0.7743 |
| AF-P55454-F1-model_v4 | 55 | 444 | 41 | 358 | 0.6304 |
0.8099 |