PROTEIN: HRGMv2_2075_17_38
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Protein File & Metadata
Source:
HRGMv2_2075_17_38.pdb
Genome ID:
Protein ID:
HRGMv2_2075_17_38
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Protein Sequence
MQMQNKGNKI KENRMMCALE YLLLFFMVIC ITSIWLRQAP IFYYLGYLKA SIPILTVGIV 60 LAKALSSSNK IIISKECFSW IMFFVLCVFG GAIGSSGTAS FSRAIEITVY CICFLLLSYA 120 LDKEELSRFF MRYVNIITLI AVISLFFYFG GSILNIIPAT GKVSFEWDLT RSADSYFFLY 180 YEPQISDNLL LGVTKNCGIF TEATMYGFLL SNAYMFHRMN MKSGKHGKII SIILLGTILT 240 TLSTTPILTV LIFETSNILT ARISNRHLAN LRTVFFPVIV LAAIWIATIV IGDKLSTASY 300 DIRFDHIVSC IKVFRENLLL GLGYGSLDVL KTYFSYQQGL SVGIPYLLAM GGIGALLMLS 360 IPVIRFLINS WTVRNWMGIS YVLAFIFSFF FTNIVFNFTL QWLIISGVFL KGSYEMKKEV 420 TVKRGGYCHE IISSIIDNLR TKVPRPDIGM AM 452
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 4 | 419 | 1 | 405 | 0.6779 |
0.7385 |
| AF-A0A0H3H4H7-F1-model_v4 | 7 | 418 | 5 | 387 | 0.6646 |
0.7419 |
| AF-Q9HUG6-F1-model_v4 | 5 | 437 | 10 | 401 | 0.6585 |
0.735 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 8 | 447 | 17 | 471 | 0.5754 |
0.7433 |
| AF-B8DZR6-F1-model_v4 | GT9 | 8 | 452 | 38 | 701 | 0.556 |
0.7197 |
| UII34295.1 | GT4 | 1 | 443 | 3 | 775 | 0.5397 |
0.7025 |
| AF-A0A0C5WHY3-F1-model_v4 | GT4 | 5 | 452 | 1 | 730 | 0.5355 |
0.6826 |
| AF-E6U9X7-F1-model_v4 | GT0 | 5 | 438 | 2 | 466 | 0.5328 |
0.7089 |
| AF-D9S8K7-F1-model_v4 | GT4 | 6 | 452 | 7 | 756 | 0.5303 |
0.6865 |
| AF-B8IGI7-F1-model_v4 | GH16_7 | 10 | 452 | 16 | 479 | 0.5259 |
0.7015 |
| K2DNF3 | GT83 | 11 | 424 | 17 | 453 | 0.5184 |
0.7648 |
| AF-A0A5B7R2V6-F1-model_v4 | GH5_39 | 8 | 412 | 379 | 784 | 0.4606 |
0.6556 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 8 | 447 | 17 | 471 | 0.5754 |
0.7433 |
| B5YD26 | GT9 | 8 | 452 | 37 | 697 | 0.5538 |
0.7167 |
| UII34295.1 | GT4 | 1 | 443 | 3 | 775 | 0.5397 |
0.7025 |
| A0A0C5WHY3 | GT4 | 5 | 452 | 1 | 730 | 0.5355 |
0.6826 |
| D9S8K7 | GT4 | 6 | 452 | 7 | 756 | 0.5303 |
0.6865 |
| B8IGI7 | GH16_7 | 10 | 452 | 16 | 479 | 0.5259 |
0.7015 |
| K2DNF3 | GT83 | 11 | 424 | 17 | 453 | 0.5184 |
0.7648 |
| A0A5B7R2V6 | GH5_39 | 8 | 412 | 379 | 784 | 0.4606 |
0.6556 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 9 | 434 | 1 | 382 | 0.6924 |
0.7725 |
| AF-P71238-F1-model_v4 | 4 | 419 | 1 | 405 | 0.6779 |
0.7385 |
| AF-Q02729-F1-model_v4 | 4 | 434 | 1 | 413 | 0.6629 |
0.7272 |
| AF-Q48456-F1-model_v4 | 8 | 422 | 17 | 429 | 0.6588 |
0.7198 |
| AF-Q9HUG6-F1-model_v4 | 5 | 437 | 10 | 401 | 0.6585 |
0.735 |
| AF-Q6F7F9-F1-model_v4 | 4 | 421 | 1 | 407 | 0.6116 |
0.7515 |