PROTEIN: HRGMv2_2037_3_39
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Protein File & Metadata
Source:
HRGMv2_2037_3_39.pdb
Genome ID:
Protein ID:
HRGMv2_2037_3_39
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Protein Sequence
MKQIIYSKFS NERNYRFAIR TDICEDENGQ RSVRKVCSCP EGQLHMTELY RWYQIFSEAC 60 KGTWLSYNRC EIIPGGVELE YVEGKTLEEC LEEVEKTQGV EAMAELFLKY LYAIRDMHSS 120 MEFQETAKFR NVFGDFLADP KKLGLRCASV TNIDLICENI LLKDGQGTVI DYEWSFDFPV 180 PVNYLLYRNI FYFREHAGRN YLMKYDFYKE LGITREEIIA YDKMEENLQH YVCRDHIPVR 240 DLYEDVSPGM YQVDYTSHTE WLQIYYDDGK GLREEHSRKF GVKDGKVEGK LFLKPEWKLL 300 RIDPGSVSGF VEIKKLEIDG KDMTSNLQVA DGIRSGSYVC FTQNDPNMML AELPENAREL 360 EIALRIWPVD QIPMEKAAQW VWQLEVQSQT LKQMENTRVW KVYQKYRKAV ERKHS 415
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9AGZ0-F1-model_v4 | GT2 | 2 | 361 | 1 | 610 | 0.4602 |
0.6346 |
| AF-D9R088-F1-model_v4 | GT2 , GT4 | 1 | 415 | 1 | 808 | 0.4482 |
0.6422 |
| A0A239QLG0 | GT2 | 1 | 366 | 1 | 889 | 0.4453 |
0.6986 |
| QWT52131.1 | GT2 | 1 | 412 | 1 | 865 | 0.4277 |
0.6188 |
| C6LFR9 | GT2 , GT4 | 1 | 415 | 300 | 1520 | 0.3741 |
0.6166 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 398 | 300 | 1742 | 0.3682 |
0.6291 |
| A0A2T4T973 | GT2 , GT4 | 1 | 359 | 47 | 1069 | 0.3654 |
0.631 |
| A0A829WPC6 | GT2 , GT4 | 1 | 360 | 52 | 1117 | 0.3621 |
0.6316 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 1 | 389 | 232 | 943 | 0.3183 |
0.5084 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A239QLG0 | GT2 | 1 | 366 | 1 | 889 | 0.4453 |
0.6986 |
| QWT52131.1 | GT2 | 1 | 412 | 1 | 865 | 0.4277 |
0.6188 |
| C6LFR9 | GT2 , GT4 | 1 | 415 | 300 | 1520 | 0.3741 |
0.6166 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 398 | 300 | 1742 | 0.3682 |
0.6291 |
| A0A2T4T973 | GT2 , GT4 | 1 | 359 | 47 | 1069 | 0.3654 |
0.631 |
| A0A829WPC6 | GT2 , GT4 | 1 | 360 | 52 | 1117 | 0.3621 |
0.6316 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.