PROTEIN: HRGMv2_1913_14_6
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Protein File & Metadata
Source:
HRGMv2_1913_14_6.pdb
Genome ID:
Protein ID:
HRGMv2_1913_14_6
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Protein Sequence
MKEIKNRVEV LITTMHCKDY IELLNRMNIQ GSSRIGNQSD KNEITEFEYN NAIHTAYQFR 60 EKGVGLNRNN LLMRTNSEFC LFGDDDIVYV NNYESIVLQC FQKYKNADVL IFNLDEKYSK 120 RYKIKEDHRV NFFNFMRYGT ARVAIRTKSI HMHGILFNTC FGGGTLHSNG EDTLFLNACL 180 KAGLHVYAVA QTIGTLTDDR QSSWFHGYND KYFVDKGMLY YLINRRYYWV LIFQDAARHR 240 KMYNKKFSYL MKIMNRGALD AKNRTYK 267
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57022-F1-model_v4 | 4 | 243 | 2 | 245 | 0.7037 |
0.7789 |
| AF-H9L470-F1-model_v4 | 6 | 244 | 1 | 239 | 0.6959 |
0.7723 |
| AF-Q48215-F1-model_v4 | 6 | 245 | 1 | 253 | 0.6934 |
0.7895 |
| AF-P71239-F1-model_v4 | 6 | 244 | 1 | 239 | 0.6905 |
0.7678 |
| AF-Q9HUG5-F1-model_v4 | 1 | 255 | 4 | 276 | 0.69 |
0.7778 |
| AF-K0EVS3-F1-model_v4 | 4 | 245 | 1 | 260 | 0.69 |
0.8 |
| AF-O24928-F1-model_v4 | 4 | 243 | 1 | 244 | 0.6897 |
0.7736 |
| AF-K0F1F2-F1-model_v4 | 4 | 246 | 1 | 262 | 0.6883 |
0.7915 |
| AF-Q48214-F1-model_v4 | 7 | 251 | 1 | 266 | 0.6867 |
0.8014 |
| AF-P9WMX3-F1-model_v4 | 3 | 267 | 1 | 298 | 0.6803 |
0.753 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B1YHH4-F1-model_v4 | GT0 | 6 | 267 | 1 | 262 | 0.9539 |
0.9721 |
| AF-A0A7Z2S0H0-F1-model_v4 | GT2 | 6 | 265 | 1 | 261 | 0.9487 |
0.9729 |
| AF-A0A2H4H6E7-F1-model_v4 | GT0 | 6 | 266 | 1 | 263 | 0.948 |
0.9736 |
| AF-A0A1C9IFE7-F1-model_v4 | GT0 | 6 | 266 | 1 | 263 | 0.9459 |
0.9719 |
| AF-A0A1C9IG02-F1-model_v4 | GT0 | 6 | 266 | 1 | 263 | 0.9458 |
0.9718 |
| QTE74990.1 | GT0 | 4 | 265 | 1 | 256 | 0.9372 |
0.9671 |
| UUV99897.1 | GT0 | 6 | 264 | 1 | 264 | 0.9351 |
0.9682 |
| USL25724.1 | GT2 | 6 | 267 | 1 | 268 | 0.9342 |
0.9649 |
| AF-A0A516QZC6-F1-model_v4 | GT0 | 6 | 266 | 1 | 264 | 0.9329 |
0.9636 |
| WBL14826.1 | GT2 | 6 | 267 | 1 | 265 | 0.9321 |
0.9611 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| USL25724.1 | GT2 | 6 | 267 | 1 | 268 | 0.9342 |
0.9649 |
| WBL14826.1 | GT2 | 6 | 267 | 1 | 265 | 0.9321 |
0.9611 |
| A0A1S6IMD8 | GT2 | 6 | 266 | 1 | 258 | 0.926 |
0.9544 |
| QIH75555.1 | GT2 | 6 | 263 | 1 | 257 | 0.9195 |
0.95 |
| WHY86074.1 | GT2 | 6 | 267 | 1 | 264 | 0.9034 |
0.9381 |
| R6RPS1 | GT2 | 5 | 266 | 1 | 262 | 0.9 |
0.9302 |
| QZO08130.1 | GT2 | 6 | 267 | 1 | 264 | 0.8847 |
0.9201 |
| UJH89864.1 | GT2 | 6 | 254 | 1 | 247 | 0.8804 |
0.9299 |
| BCP61837.1 | GT2 | 8 | 241 | 1 | 236 | 0.8723 |
0.9448 |
| A0A0X8C2B1 | GT2 | 4 | 266 | 4 | 272 | 0.853 |
0.8974 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6h21-assembly1.cif.gz_B | 3 | 263 | 1 | 279 | 0.6546 |
0.7429 |
| 6h4m-assembly3.cif.gz_P | 4 | 263 | 1 | 270 | 0.6542 |
0.7351 |
| 6hnq-assembly4.cif.gz_E | 3 | 260 | 1 | 282 | 0.6534 |
0.7516 |
| 6h2n-assembly1.cif.gz_B | 3 | 263 | 1 | 278 | 0.653 |
0.7398 |
| 5hea-assembly1.cif.gz_A | 5 | 257 | 1 | 267 | 0.6518 |
0.7219 |
| 6h2n-assembly1.cif.gz_C | 4 | 260 | 1 | 276 | 0.6509 |
0.7452 |
| 6h4m-assembly4.cif.gz_Q | 4 | 260 | 1 | 279 | 0.6505 |
0.7475 |
| 6h4m-assembly2.cif.gz_H | 4 | 263 | 1 | 283 | 0.6505 |
0.7442 |
| 6hnq-assembly2.cif.gz_H | 3 | 263 | 1 | 283 | 0.6501 |
0.7416 |
| 6h1j-assembly1.cif.gz_B | 4 | 263 | 1 | 278 | 0.6494 |
0.7379 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q03084-F1-model_v4 | 3 | 246 | 3 | 259 | 0.7139 |
0.8088 |
| AF-B5L3F2-F1-model_v4 | 2 | 244 | 1 | 245 | 0.7127 |
0.7832 |
| AF-Q46635-F1-model_v4 | 7 | 245 | 1 | 252 | 0.7095 |
0.8088 |
| AF-O32268-F1-model_v4 | 4 | 243 | 4 | 248 | 0.7059 |
0.7843 |
| AF-Q4KXC9-F1-model_v4 | 4 | 244 | 5 | 254 | 0.7055 |
0.784 |
| AF-Q57022-F1-model_v4 | 4 | 243 | 2 | 245 | 0.7037 |
0.7789 |
| AF-Q077R2-F1-model_v4 | 5 | 243 | 1 | 238 | 0.6968 |
0.7782 |
| AF-Q48215-F1-model_v4 | 6 | 245 | 1 | 253 | 0.6934 |
0.7895 |
| AF-P71054-F1-model_v4 | 3 | 245 | 2 | 255 | 0.6926 |
0.7947 |
| AF-D4GYH3-F1-model_v4 | 6 | 267 | 1 | 313 | 0.6911 |
0.7811 |