PROTEIN: HRGMv2_1905_31_12
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Protein File & Metadata
Source:
HRGMv2_1905_31_12.pdb
Genome ID:
Protein ID:
HRGMv2_1905_31_12
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Protein Sequence
MNYDKFPETK IKGYDQEAFD DLSSMRQELL KKIHDVNCLV VDCYPGVDDE VLDFIQDVYE 60 PEIIIRSEDI FYDKDKLYEM MKPHLTEDRV RGVMFYGVLE DFVNQKKLKE MKKVLHEQKR 120 ILIYGVGAGL ISQGDLYIYC DLARWEIQCR YRQGMPNFKA DNDDEDSLKK IKRGFFIEWR 180 VADKHKMKMF EKVDYFIDSN QKGHLKMVTG EALRNGLKQI AKRPFRLVPY FDPGVWGGQW 240 MKEHCGLDPQ EKNYAWSFDG VPEENSLYLR FGKTRIEIPA MDLVLYQPIE LLGMKNYCRF 300 GAEFPIRFDF LDTIDGQNLS LQVHPLTEYI KSHFGMTYTQ DESYYILDAQ EHGGVYLGLK 360 ENIDSKQMID DLKIAQTGKQ SFDADKYVNF FPAKKHDHFL IPAGTVHCSS SGCMVLEISA 420 TPYIFTFKLW DWDRLGLDGL PRPIHIEDGE KNIQWDRTTK WVEDNLVNHV EMMHQDDDYC 480 EEKTGLHELE FIETRRFTSS CLTKHSSENG VHMLNLVEGT SAVVESPTNA FEPFVVHYAE 540 TFIIPSAVGE YTIRPFDSDE TIKFIKAYIR NE 572
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DQJ1-F1-model_v4 | 219 | 569 | 1 | 314 | 0.7012 |
0.9123 |
| AF-Q2G223-F1-model_v4 | 223 | 570 | 1 | 312 | 0.6976 |
0.91 |
| AF-A0A132Z9P5-F1-model_v4 | 219 | 571 | 1 | 316 | 0.6974 |
0.9056 |
| AF-Q2FWB3-F1-model_v4 | 235 | 569 | 1 | 285 | 0.6777 |
0.9118 |
| AF-A0A0H3GS87-F1-model_v4 | 223 | 572 | 1 | 392 | 0.6185 |
0.8244 |
| AF-P25081-F1-model_v4 | 223 | 571 | 1 | 391 | 0.617 |
0.8233 |
| AF-Q32FG5-F1-model_v4 | 223 | 571 | 1 | 391 | 0.6167 |
0.823 |
| AF-P00946-F1-model_v4 | 223 | 571 | 1 | 391 | 0.6165 |
0.8228 |
| AF-Q9FZH5-F1-model_v4 | 113 | 572 | 1 | 440 | 0.6139 |
0.7026 |
| AF-A0A0D2GQV2-F1-model_v4 | 218 | 570 | 1 | 407 | 0.611 |
0.8242 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-G2SXW7-F1-model_v4 | GH1 | 16 | 572 | 223 | 771 | 0.465 |
0.5593 |
| AF-D4KJA3-F1-model_v4 | GH1 | 16 | 570 | 224 | 768 | 0.4576 |
0.5533 |
| AF-D4KYD8-F1-model_v4 | GH1 | 14 | 570 | 224 | 768 | 0.4542 |
0.5492 |
| AF-A0A1D9P395-F1-model_v4 | GH1 | 15 | 570 | 223 | 765 | 0.4529 |
0.5483 |
| AF-A0A7U6KFF6-F1-model_v4 | GH1 | 13 | 571 | 224 | 765 | 0.4511 |
0.5472 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1qwr-assembly2.cif.gz_B | 222 | 569 | 1 | 314 | 0.6996 |
0.9104 |
| 1zx5-assembly1.cif.gz_A | 217 | 571 | 1 | 300 | 0.6861 |
0.9075 |
| 5zvr-assembly1.cif.gz_A | 219 | 571 | 1 | 387 | 0.6224 |
0.8171 |
| 5zuw-assembly1.cif.gz_A | 220 | 571 | 1 | 391 | 0.6199 |
0.8206 |
| 5zt4-assembly1.cif.gz_A | 219 | 571 | 1 | 391 | 0.6197 |
0.8181 |
| 5zv0-assembly1.cif.gz_A | 219 | 571 | 1 | 387 | 0.6196 |
0.8135 |
| 5zt5-assembly1.cif.gz_A | 219 | 571 | 1 | 392 | 0.6182 |
0.8174 |
| 5zvx-assembly1.cif.gz_A | 219 | 571 | 1 | 392 | 0.6178 |
0.8168 |
| 5zvu-assembly1.cif.gz_A | 222 | 571 | 1 | 381 | 0.6169 |
0.8094 |
| 5zuy-assembly1.cif.gz_A | 220 | 571 | 1 | 392 | 0.6134 |
0.8131 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q59935-F1-model_v4 | 219 | 572 | 1 | 316 | 0.6987 |
0.9073 |
| AF-O05511-F1-model_v4 | 219 | 569 | 1 | 315 | 0.6986 |
0.9082 |
| AF-P39841-F1-model_v4 | 218 | 569 | 1 | 316 | 0.6954 |
0.903 |
| AF-O31646-F1-model_v4 | 218 | 569 | 1 | 315 | 0.6908 |
0.8981 |
| AF-P25081-F1-model_v4 | 223 | 571 | 1 | 391 | 0.617 |
0.8233 |
| AF-Q83KZ1-F1-model_v4 | 223 | 571 | 1 | 391 | 0.6168 |
0.8231 |
| AF-P00946-F1-model_v4 | 223 | 571 | 1 | 391 | 0.6165 |
0.8228 |
| AF-Q9FZH5-F1-model_v4 | 113 | 572 | 1 | 440 | 0.6139 |
0.7026 |
| AF-Q8HXX2-F1-model_v4 | 215 | 571 | 1 | 423 | 0.6032 |
0.8216 |
| AF-Q924M7-F1-model_v4 | 12 | 571 | 1 | 423 | 0.6016 |
0.6993 |