PROTEIN: HRGMv2_1892_12_8
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_1892_12_8.pdb
Genome ID:
Protein ID:
HRGMv2_1892_12_8
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MLETPVLLLE NFDEESQMLY QSFRTSGFDG PVFTFSDEGF LPDDVTSIYT YYCGKKEGGK 60 ARYFNQIDVP DYWEIRASNS GGQVFDLNHE RGKIFFASPL HKRLVKIVDW YDDTHVVRAS 120 DHYNKYGFLY AKTIFNKKGQ LVSRSYYDVS GNEKVVENFV THDIILNQND KVYIFKNKVE 180 FAKHLFTELD VYPTRLFYNS LSNPFFVSES LEDREHSDVL FWQEGYREDI PGNMQVILDG 240 HSRRTSKIYV QKKEAYEKLI ELGANRDIVK PLGFVYNFEK ENQHTNNILI CTNSDRIEKL 300 NELVVCMPNM KFHVCALTEM SQKLMSFEKY DNVHLYPGCK ASEILNLFNT CDYFLDINYE 360 NEIVDATKEA FLHNLLILGF NQTIHNRKYV LPDFVFDANN YQDMIRVILD ASHLDINLER 420 QRNVAMTQNV QDYKNV 436
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FUW8-F1-model_v4 | 5 | 436 | 1 | 446 | 0.936 |
0.9692 |
| AF-Q2FUW3-F1-model_v4 | 4 | 436 | 1 | 510 | 0.5548 |
0.6247 |
| AF-O05083-F1-model_v4 | 2 | 436 | 1 | 352 | 0.5454 |
0.6234 |
| AF-Q2G0L2-F1-model_v4 | 4 | 436 | 1 | 492 | 0.5419 |
0.6022 |
| AF-Q2G0L3-F1-model_v4 | 4 | 436 | 1 | 488 | 0.5401 |
0.5944 |
| AF-Q2FUW7-F1-model_v4 | 4 | 436 | 1 | 495 | 0.5333 |
0.5942 |
| AF-Q2G290-F1-model_v4 | 3 | 436 | 1 | 381 | 0.5165 |
0.5754 |
| AF-I1MKJ6-F1-model_v4 | 1 | 436 | 28 | 451 | 0.4869 |
0.5328 |
| AF-A0A0N4UIH0-F1-model_v4 | 3 | 436 | 10 | 375 | 0.4849 |
0.5797 |
| AF-A0A3P7ERJ7-F1-model_v4 | 3 | 436 | 11 | 376 | 0.4834 |
0.5841 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A385XML0-F1-model_v4 | GT8 | 5 | 436 | 1 | 439 | 0.9637 |
0.9817 |
| AF-A0A1Y0FAB7-F1-model_v4 | GT8 | 5 | 436 | 1 | 439 | 0.9603 |
0.9807 |
| AF-A0A1D7TQ49-F1-model_v4 | GT8 | 5 | 436 | 1 | 439 | 0.9601 |
0.9805 |
| AF-A0A5P6VTZ8-F1-model_v4 | GT8 | 1 | 436 | 1 | 446 | 0.9584 |
0.9758 |
| AF-A0A089QAW1-F1-model_v4 | GT8 | 3 | 436 | 1 | 441 | 0.9583 |
0.977 |
| AF-A0A239X8E7-F1-model_v4 | GT8 | 5 | 436 | 1 | 439 | 0.9539 |
0.9743 |
| AF-A0A4U9ZI27-F1-model_v4 | GT8 | 5 | 436 | 1 | 438 | 0.9534 |
0.9729 |
| AF-A0A4V0GZ77-F1-model_v4 | GT8 | 5 | 436 | 1 | 438 | 0.953 |
0.9726 |
| A0A6L8MZD6 | GT8 | 5 | 436 | 1 | 436 | 0.9527 |
0.9735 |
| A0A9P1S375 | GT8 | 5 | 436 | 1 | 441 | 0.952 |
0.9741 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P6VTZ8 | GT8 | 1 | 436 | 1 | 446 | 0.9584 |
0.9758 |
| A0A089QAW1 | GT8 | 3 | 436 | 1 | 441 | 0.9583 |
0.977 |
| A0A6L8MZD6 | GT8 | 5 | 436 | 1 | 436 | 0.9527 |
0.9735 |
| A0A9P1S375 | GT8 | 5 | 436 | 1 | 441 | 0.952 |
0.9741 |
| SQG82531.1 | GT8 | 5 | 436 | 1 | 439 | 0.9511 |
0.9728 |
| A0A380JYR0 | GT8 | 5 | 436 | 1 | 439 | 0.9509 |
0.974 |
| A0A3S6QT94 | GT8 | 5 | 436 | 1 | 438 | 0.9498 |
0.9706 |
| A0A0R1V511 | GT8 | 5 | 436 | 1 | 443 | 0.9492 |
0.9735 |
| A0A428GIL4 | GT8 | 5 | 436 | 1 | 442 | 0.9489 |
0.9718 |
| A0A3G9J7U1 | GT8 | 5 | 436 | 1 | 437 | 0.9477 |
0.9693 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5e9u-assembly2.cif.gz_H | 5 | 436 | 1 | 441 | 0.9158 |
0.9457 |
| 6oyc-assembly4.cif.gz_A | 4 | 436 | 1 | 495 | 0.6311 |
0.6996 |
| 5vae-assembly5.cif.gz_G | 4 | 436 | 1 | 502 | 0.6278 |
0.7024 |
| 5vae-assembly5.cif.gz_E | 4 | 436 | 1 | 502 | 0.6278 |
0.7019 |
| 5vae-assembly1.cif.gz_A | 4 | 436 | 1 | 503 | 0.6241 |
0.7019 |
| 6lnw-assembly1.cif.gz_A | 4 | 436 | 1 | 485 | 0.6233 |
0.6869 |
| 7ec7-assembly1.cif.gz_A | 4 | 436 | 1 | 492 | 0.5636 |
0.6258 |
| 7ec7-assembly2.cif.gz_B | 4 | 436 | 1 | 490 | 0.555 |
0.6153 |
| 4pqg-assembly1.cif.gz_A | 1 | 436 | 1 | 499 | 0.5442 |
0.6053 |
| 5vaf-assembly1.cif.gz_A | 4 | 436 | 1 | 503 | 0.5381 |
0.602 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2UR90-F1-model_v4 | 5 | 436 | 1 | 439 | 0.9457 |
0.9714 |
| AF-Q79T00-F1-model_v4 | 5 | 436 | 1 | 441 | 0.9448 |
0.9755 |
| AF-A0A0S4NND9-F1-model_v4 | 5 | 436 | 1 | 434 | 0.9 |
0.9268 |
| AF-A1C3M0-F1-model_v4 | 5 | 436 | 1 | 434 | 0.8944 |
0.921 |
| AF-Q3S2Y1-F1-model_v4 | 5 | 436 | 1 | 436 | 0.8938 |
0.9234 |
| AF-Q9AET9-F1-model_v4 | 4 | 436 | 1 | 515 | 0.6123 |
0.6909 |
| AF-Q2FUW3-F1-model_v4 | 4 | 436 | 1 | 510 | 0.5548 |
0.6247 |
| AF-A0A0H2WWV6-F1-model_v4 | 3 | 436 | 1 | 487 | 0.5464 |
0.6035 |
| AF-O05083-F1-model_v4 | 2 | 436 | 1 | 352 | 0.5454 |
0.6234 |
| AF-P0DMP7-F1-model_v4 | 2 | 436 | 1 | 335 | 0.5434 |
0.6346 |