PROTEIN: HRGMv2_1892_11_31
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Protein File & Metadata
Source:
HRGMv2_1892_11_31.pdb
Genome ID:
Protein ID:
HRGMv2_1892_11_31
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Protein Sequence
MAFNRMCKVW MVFKMARELI RKATLEDMPV LLEIYERARK FMVSTGNTNQ WTNGYPSREI 60 LTEDIEKNEM YVLEDEDGIQ ASFVFYCGID PCYNKIYDGQ WLNDEPYGVI HRIATRGLKK 120 HMADIILEYC ESKIDNIRMD THMDNKPMQN FMLKHGFKHV GTIYLKNGQS RLAFHCNLNK 180 N 181
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CYK9-F1-model_v4 | 16 | 179 | 1 | 164 | 0.857 |
0.9188 |
| AF-A0A132PA73-F1-model_v4 | 16 | 179 | 1 | 170 | 0.8059 |
0.8866 |
| AF-Q2FYL4-F1-model_v4 | 19 | 180 | 1 | 169 | 0.8004 |
0.8866 |
| AF-Q0P7R6-F1-model_v4 | 12 | 181 | 2 | 174 | 0.7987 |
0.8594 |
| AF-K0F5F1-F1-model_v4 | 20 | 180 | 1 | 166 | 0.7449 |
0.8335 |
| AF-K0EPZ0-F1-model_v4 | 12 | 181 | 1 | 174 | 0.7271 |
0.8126 |
| AF-K0EZR6-F1-model_v4 | 16 | 179 | 1 | 177 | 0.7043 |
0.7896 |
| AF-K0F3Q7-F1-model_v4 | 15 | 180 | 10 | 172 | 0.6934 |
0.7774 |
| AF-K0F4U8-F1-model_v4 | 2 | 180 | 1 | 197 | 0.6916 |
0.7784 |
| AF-Q2G1V1-F1-model_v4 | 15 | 181 | 3 | 166 | 0.6869 |
0.7754 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6P1KIU4-F1-model_v4 | GT0 | 1 | 181 | 3 | 548 | 0.4621 |
0.709 |
| AF-A0A2K8K3X2-F1-model_v4 | GT0 | 1 | 181 | 2 | 562 | 0.4462 |
0.6888 |
| AF-A0A2D2LVP3-F1-model_v4 | GT0 | 1 | 181 | 8 | 568 | 0.4435 |
0.6862 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2pc1-assembly1.cif.gz_A | 12 | 180 | 3 | 173 | 0.8351 |
0.8963 |
| 2fia-assembly1.cif.gz_A | 16 | 179 | 1 | 157 | 0.7738 |
0.8495 |
| 3h4q-assembly1.cif.gz_A | 18 | 179 | 1 | 145 | 0.7391 |
0.8456 |
| 8osp-assembly2.cif.gz_C | 15 | 178 | 5 | 174 | 0.6931 |
0.7806 |
| 4r3k-assembly1.cif.gz_A | 12 | 178 | 1 | 157 | 0.661 |
0.7393 |
| 6ag5-assembly1.cif.gz_A | 12 | 178 | 1 | 157 | 0.6596 |
0.7341 |
| 6ag4-assembly1.cif.gz_A | 12 | 178 | 1 | 157 | 0.6586 |
0.7368 |
| 4e2a-assembly1.cif.gz_A | 15 | 178 | 1 | 170 | 0.6493 |
0.7239 |
| 7mx2-assembly1.cif.gz_A | 12 | 179 | 2 | 152 | 0.6476 |
0.7394 |
| 4ua3-assembly1.cif.gz_A | 9 | 181 | 9 | 185 | 0.6409 |
0.7098 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P54951-F1-model_v4 | 15 | 181 | 2 | 164 | 0.7351 |
0.8064 |
| AF-O31513-F1-model_v4 | 13 | 179 | 8 | 178 | 0.7287 |
0.8129 |
| AF-O34350-F1-model_v4 | 15 | 181 | 3 | 165 | 0.6894 |
0.7821 |
| AF-O74311-F1-model_v4 | 12 | 179 | 1 | 150 | 0.6639 |
0.7572 |
| AF-Q54MP9-F1-model_v4 | 10 | 180 | 21 | 180 | 0.6249 |
0.7383 |
| AF-Q8ZPD3-F1-model_v4 | 15 | 180 | 1 | 164 | 0.6204 |
0.6953 |
| AF-Q9USH6-F1-model_v4 | 9 | 181 | 27 | 203 | 0.6175 |
0.7102 |
| AF-Q9QXS4-F1-model_v4 | 9 | 180 | 1 | 221 | 0.6164 |
0.7423 |
| AF-Q9UHE5-F1-model_v4 | 12 | 180 | 3 | 221 | 0.6128 |
0.7491 |
| AF-Q0IHH1-F1-model_v4 | 6 | 179 | 45 | 273 | 0.533 |
0.6811 |