PROTEIN: HRGMv2_1814_21_15
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Protein File & Metadata
Source:
HRGMv2_1814_21_15.pdb
Genome ID:
Protein ID:
HRGMv2_1814_21_15
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Protein Sequence
MSRSIRICSY LLLPLIYLLV NVKIAQLGES FPITIVTFLP VLLLLFIERI SIKKLMIALG 60 VGAGLTAFNY LFGQSLDASK YVTSTMLFVY IVIIIGMVWS IRFKTVSPHN YRKILRFFYM 120 VVAFVVALAA VEMAQIILTG GSSLMEGISK YLIYSNSYVL NFIKFGGKRT TALYFEPAFF 180 ALALISIWLS IKQFGIKTPK TDAMILAGII LSGSFSGVMT FILFYLLEWA FQYLNKDAIR 240 KKLPLAIISL GVFLVGVVFA FPYIAERLGD LGTEGSSSYY RIVGPLVMVG YSLTHIDGVV 300 RFGSLYEYVA SFGIFNGADV GKTIDNGLYL LIIYFSWFAV LLTAWYMWKI LKMTLNAFGD 360 NQNFRVQLYL FTPVSLFFTG SIFSPEYAFL IVCPFILRKA LNITNS 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 406 | 1 | 405 | 0.9853 |
0.9912 |
| AF-H9L488-F1-model_v4 | 1 | 404 | 1 | 404 | 0.9845 |
0.9915 |
| AF-Q2G288-F1-model_v4 | 4 | 406 | 5 | 410 | 0.6931 |
0.7297 |
| AF-Q9I1M9-F1-model_v4 | 4 | 406 | 39 | 454 | 0.6691 |
0.7484 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B5YD26-F1-model_v4 | GT9 | 4 | 406 | 40 | 445 | 0.5674 |
0.7574 |
| AF-B8DZR6-F1-model_v4 | GT9 | 4 | 406 | 40 | 446 | 0.5658 |
0.7554 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 4 | 406 | 18 | 448 | 0.5523 |
0.7281 |
| AF-A0A386XPQ4-F1-model_v4 | GT0 | 4 | 406 | 33 | 450 | 0.5384 |
0.7313 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B5YD26 | GT9 | 4 | 406 | 40 | 445 | 0.5674 |
0.7574 |
| UII34295.1 | GT4 | 1 | 406 | 6 | 419 | 0.5531 |
0.7338 |
| A0A517MXC4 | GT26 | 4 | 406 | 18 | 448 | 0.5523 |
0.7281 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 406 | 1 | 405 | 0.9853 |
0.9912 |
| AF-O32270-F1-model_v4 | 1 | 406 | 2 | 480 | 0.6406 |
0.7163 |