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PROTEIN: HRGMv2_1813_20_27

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_1813_20_27.pdb
Genome ID:
HRGMv2_1813
Protein ID:
HRGMv2_1813_20_27

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Detailed structural information will appear here after analysis...

Protein Sequence 
MNFSKLTSAC   LLASAGWAGL   ANAAGCDSNL   LKDPGFEQGG   AGWSLASAQV   VAGGHGGQSS 60
LFYQNHNPAN   YHNMLQTLSV   KPGQQLAFGA   WVRGENLRGK   GENQGAGVFV   ESYDDQGRFL 120
AGSYPQGLLG   TSGWQPVAGD   FRVPPRAVKV   VLGVYLRQGT   TGSAWFDDVY   ACLQPVAPEL 180
YQMRSGKEAA   SSLIEVVDPQ   QVQVDSTLVD   DKNTTVKHDS   RRYAISGQQK   VEFPLPADLP 240
AGEYRLQQQV   TDVASQRSQR   SEMPISVGRP   QPKVALDAQG   YVLKQGKRFF   PLGIYMYGEM 300
ATDEHLARIR   DAGFNTLLNY   NYGTGRDPYN   YFRKTQQYGL   QVIFSLKDMY   AGTRFAPETK 360
MSYPQLTASY   VEKFKHQPNL   LAWYINDELG   PEYVPQIEQK   HLQVKQLDPD   HLTFQVLDKT 420
GTLNAYFNSS   DVLASDPYPV   GRDADLTRTL   EYSRITSQVA   RQAKGAWLVM   QIMDHAAYAP 480
GRKPRQPTEA   EIRNQAWLGL   IGGARGILFY   SYTDLFYKRQ   RGGFSQQEFD   AIWRGVAGVA 540
QQIVSFEPYL   LSGESRLLQG   NNTAIPARLF   IRGDRGLVLI   ANPYYRQMSA   RFDLPAGWQA 600
QGQRQIEAEL   PSMGSRAVWV   QRQTEDKG 628
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A175VZB8-F1-model_v4 10 624 10 564 0.5899 0.6421
AF-U7Q0B0-F1-model_v4 10 622 10 646 0.5678 0.6002
AF-A0A0H3GTX2-F1-model_v4 278 624 1 541 0.4892 0.7949
AF-A0A132ZDY8-F1-model_v4 210 622 1 561 0.4824 0.6814
AF-K0EUG4-F1-model_v4 177 624 14 653 0.4516 0.6384
AF-Q54S16-F1-model_v4 277 628 49 737 0.4199 0.7831
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A7S4H3P1-F1-model_v4 CBM16 , GH0 21 622 17 610 0.7414 0.7885
AF-A0A2S0KQW4-F1-model_v4 GH5 22 552 15 514 0.6422 0.7351
AF-A0A2S0KQU9-F1-model_v4 GH5 24 549 15 513 0.6084 0.7014
AF-A0A2S0KZB6-F1-model_v4 GH5 24 548 17 503 0.5932 0.6915
AF-A0A2S0KYV1-F1-model_v4 GH5 24 547 20 501 0.5878 0.6891
AF-A0A286RCT9-F1-model_v4 GH5 24 548 22 521 0.57 0.6648
AF-A5FCH7-F1-model_v4 GH140 272 624 34 468 0.5642 0.8476
AF-A0A344LW64-F1-model_v4 GH140 272 623 34 467 0.5631 0.8478
AF-A0A7L8UHB4-F1-model_v4 GH140 272 624 33 466 0.5629 0.8443
AF-A0A2S1YQZ2-F1-model_v4 GH140 272 624 34 467 0.5627 0.8447
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A7S4H3P1 CBM16 , GH0 21 622 17 610 0.7414 0.7885
A0A2S0KQU9 GH5 24 549 15 513 0.6084 0.7014
A0A2S0KZB6 GH5 24 548 17 503 0.5932 0.6915
A0A2S0KTY4 GH5 22 547 26 504 0.571 0.6753
A0A286RCT9 GH5 24 548 22 521 0.57 0.6648
A0A286IMY9 GH140 271 625 25 463 0.5605 0.8421
W0IV90 GH5 17 548 23 523 0.5558 0.6479
A0A2S0KXU7 GH5 22 545 38 530 0.5528 0.6548
A0A2S0KTM9 GH5 24 548 33 522 0.5459 0.6443
A0A9X1TVM1 GH13_4 207 626 1 462 0.5272 0.67
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5msy-assembly3.cif.gz_C 271 625 8 442 0.5741 0.8443
4qfu-assembly4.cif.gz_D 271 625 9 439 0.5714 0.8449
4qfu-assembly3.cif.gz_C 271 625 8 441 0.571 0.8447
4qfu-assembly8.cif.gz_H 271 625 8 442 0.5697 0.8448
4qfu-assembly12.cif.gz_L 271 625 8 445 0.5685 0.8449
4qfu-assembly6.cif.gz_F 271 625 13 447 0.5668 0.8441
5h06-assembly3.cif.gz_C 264 625 1 495 0.5079 0.7642
2d2o-assembly1.cif.gz_A 78 622 2 585 0.493 0.559
1j0i-assembly1.cif.gz_B 78 623 2 588 0.492 0.5562
1sma-assembly1.cif.gz_A 79 623 3 588 0.492 0.5572
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q08341-F1-model_v4 79 626 4 590 0.4955 0.5607
AF-P38940-F1-model_v4 79 623 3 588 0.4928 0.5586
AF-Q08751-F1-model_v4 79 622 3 585 0.4906 0.5556
AF-P32818-F1-model_v4 79 620 3 586 0.4876 0.5548
AF-P39795-F1-model_v4 187 624 1 561 0.4742 0.6376
AF-B3DYJ8-F1-model_v4 16 626 1 664 0.4729 0.5138
AF-Q6L2Z8-F1-model_v4 177 624 14 630 0.4661 0.6451
AF-Q60053-F1-model_v4 182 620 52 666 0.4618 0.6626
AF-Q3J3M8-F1-model_v4 176 627 35 667 0.4588 0.6417
AF-Q2RTZ1-F1-model_v4 176 623 44 688 0.4581 0.6545
Download Full SwissProt Results