PROTEIN: HRGMv2_1797_3_178
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Protein File & Metadata
Source:
HRGMv2_1797_3_178.pdb
Genome ID:
Protein ID:
HRGMv2_1797_3_178
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Protein Sequence
MKNISHCCRA ILALPFFCVS SLGAEEVRPA EHDDTKTPEI SSPSFRFYGE LGMGGYMDLE 60 GKDKHKYSDG TYIEGGLEIK HGSWFGLIYG EGWTVQADHQ GNAWVPDHSW GGFEGGINRF 120 YGGYRTDDGT ELMLSLRQDS SLDDLQWWGD FTPDLGYVIP NTRDIMTAIK VQNLTGPLRY 180 SVTATPAGHH DESKAWLHFG KYDRYDDKYT YPAMMNGYIQ YDLIEGVTWM NGLEITDGTG 240 QLLLTGILSP NFAARAWHHT GRADGLDVPG TETGFMVSAM YEALKGVYLS TAYSYAKHRP 300 DSYEDETTSF MQFGIWYEYG GGRFATAFDS RFYMQNASGD PSDQIFLMQY FYW 353
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 1 | 353 | 1 | 356 | 0.9644 |
0.9753 |
| AF-P37432-F1-model_v4 | 31 | 353 | 16 | 363 | 0.7298 |
0.8205 |
| AF-P43839-F1-model_v4 | 33 | 353 | 16 | 359 | 0.7152 |
0.8049 |
| AF-Q9S4Z2-F1-model_v4 | 23 | 353 | 13 | 377 | 0.7145 |
0.8002 |
| AF-P06996-F1-model_v4 | 31 | 353 | 16 | 367 | 0.7143 |
0.809 |
| AF-A0A0H3GP71-F1-model_v4 | 31 | 353 | 21 | 381 | 0.7024 |
0.8076 |
| AF-Q5F5V7-F1-model_v4 | 41 | 353 | 17 | 348 | 0.6886 |
0.7813 |
| AF-Q9I2D1-F1-model_v4 | 28 | 353 | 21 | 399 | 0.6847 |
0.7969 |
| AF-Q8ZMK7-F1-model_v4 | 4 | 353 | 18 | 456 | 0.6141 |
0.7075 |
| AF-Q9SXB7-F1-model_v4 | 41 | 353 | 78 | 424 | 0.6127 |
0.7601 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0F6ALB9 | CBM48 | 38 | 352 | 383 | 674 | 0.3842 |
0.5966 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5o78-assembly1.cif.gz_C | 41 | 353 | 1 | 331 | 0.7474 |
0.8281 |
| 3nsg-assembly1.cif.gz_C | 35 | 353 | 1 | 341 | 0.7457 |
0.8237 |
| 4kr4-assembly1.cif.gz_B | 35 | 353 | 1 | 340 | 0.7454 |
0.8222 |
| 4kr8-assembly1.cif.gz_B | 35 | 353 | 1 | 340 | 0.7453 |
0.822 |
| 4kra-assembly1.cif.gz_B | 35 | 353 | 1 | 340 | 0.7446 |
0.8217 |
| 4kra-assembly1.cif.gz_C | 35 | 353 | 1 | 337 | 0.7444 |
0.8182 |
| 6ehe-assembly1.cif.gz_A | 41 | 353 | 1 | 302 | 0.7431 |
0.8116 |
| 6ene-assembly1.cif.gz_C | 35 | 353 | 1 | 329 | 0.7427 |
0.8088 |
| 5o77-assembly1.cif.gz_A | 35 | 353 | 1 | 337 | 0.7421 |
0.8157 |
| 4kr4-assembly1.cif.gz_C | 35 | 353 | 1 | 334 | 0.7419 |
0.8117 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 1 | 353 | 1 | 356 | 0.9644 |
0.9753 |
| AF-Q52581-F1-model_v4 | 25 | 353 | 2 | 341 | 0.7408 |
0.7936 |
| AF-J9RX10-F1-model_v4 | 30 | 353 | 15 | 357 | 0.7334 |
0.8162 |
| AF-Q56113-F1-model_v4 | 29 | 353 | 12 | 363 | 0.7326 |
0.8189 |
| AF-P29739-F1-model_v4 | 32 | 353 | 16 | 326 | 0.7319 |
0.8084 |
| AF-A0A0H3N9T8-F1-model_v4 | 31 | 353 | 16 | 363 | 0.7302 |
0.8209 |
| AF-P37432-F1-model_v4 | 31 | 353 | 16 | 363 | 0.7298 |
0.8205 |
| AF-Q48221-F1-model_v4 | 31 | 353 | 15 | 353 | 0.7241 |
0.804 |
| AF-O54340-F1-model_v4 | 33 | 353 | 17 | 343 | 0.722 |
0.7953 |
| AF-A0A4P7TN82-F1-model_v4 | 29 | 353 | 15 | 362 | 0.7212 |
0.8072 |