PROTEIN: HRGMv2_1733_4_54
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Protein File & Metadata
Source:
HRGMv2_1733_4_54.pdb
Genome ID:
Protein ID:
HRGMv2_1733_4_54
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Protein Sequence
MLSVPEKVPA RRASRAEIRR ANHHAAEKAG PIVSQHSPQA IREEIGRLLK YAPPEMRAAV 60 LGVLPAAKRT LDSGYHPEVR GVPLKSWRCL LHLLSSVASM QSDTETLLRV SNDLLGIADH 120 MAPPDEVLRQ SAEILVHALH AEMYVCRLRN SRGEWVTRAA NNIHGQSIPI VAPYLDENLR 180 RHPVMSAIMD GHVRYVVSNN LQGLERGGGS FDCVVYKEGY RSRLAFVLRE RNNRPAFGLV 240 QLYTKREYGF EAYDERFLAK CARIVSLTVG RRVAVARDTL EKAAGAMAHY GNNALNVMRN 300 QAEYCGELVE DIDANLTRAL RLSRELMAEF PSDSRGRRLA LELESILARA DLTELAGHLG 360 GVLEGTRRMT RIINSLKKSV ERPRLMHYAL GHDVLKLEDD VRHED 405
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FX96-F1-model_v4 | 102 | 402 | 2 | 364 | 0.5239 |
0.6744 |
| AF-A0A0H3GWF4-F1-model_v4 | 46 | 371 | 8 | 515 | 0.4159 |
0.5917 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6ptx-assembly1.cif.gz_A | 52 | 399 | 44 | 470 | 0.4489 |
0.5695 |
| 6pu2-assembly2.cif.gz_B | 52 | 399 | 44 | 470 | 0.4486 |
0.569 |
| 3nhq-assembly1.cif.gz_B | 52 | 405 | 46 | 371 | 0.4452 |
0.5925 |
| 3nhq-assembly1.cif.gz_A | 78 | 405 | 78 | 372 | 0.4442 |
0.6464 |
| 6tl4-assembly1.cif.gz_A | 77 | 401 | 74 | 478 | 0.4436 |
0.6062 |
| 5i5l-assembly1.cif.gz_A-2 | 78 | 400 | 55 | 465 | 0.4409 |
0.595 |
| 6r26-assembly1.cif.gz_A-2 | 78 | 399 | 55 | 461 | 0.4408 |
0.5956 |
| 6r27-assembly1.cif.gz_B | 77 | 399 | 66 | 451 | 0.4396 |
0.586 |
| 3nop-assembly1.cif.gz_C | 56 | 405 | 47 | 372 | 0.4391 |
0.5922 |
| 4r70-assembly1.cif.gz_A | 52 | 399 | 43 | 482 | 0.4375 |
0.5631 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O07527-F1-model_v4 | 73 | 405 | 1 | 319 | 0.5192 |
0.6441 |
| AF-P27713-F1-model_v4 | 65 | 390 | 1 | 404 | 0.4148 |
0.5856 |
| AF-E5KK10-F1-model_v4 | 20 | 405 | 283 | 886 | 0.393 |
0.5642 |