PROTEIN: HRGMv2_1733_13_23
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Protein File & Metadata
Source:
HRGMv2_1733_13_23.pdb
Genome ID:
Protein ID:
HRGMv2_1733_13_23
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Protein Sequence
MNILCFAPFS AAWDLHGYIE MGILQSLREK KANIIYVFCD IKSEYCYLYL HEKANCAYCQ 60 QRSAVFAADK NMPYIWLSRF AQADDHAVAT DFVESLSPEE YPYADYEGKA IGRWVLSTFI 120 SFLRENPFNC HKATHVSVYK GMLVFALETA LALERLLQQG RYDRVLMFNG RFLPFSILLD 180 MAEARKIPCY LHERGSLPNT LRVVRHDPSS KLHPMTIIPP ETLLAVPLTP DQLEKTQSIM 240 LRAETGDTGL NWDRHSPTTK YDDLRAHLNI EKDKRVWAFF VSSDDEMAAF RGYEYPDFPT 300 QLDGLIRIIQ IIADFPDVHL VIRMHPNSGA KGTKRVPWAD KLTSFLRQRN HHYVTVIAAD 360 DQVNTYQLMR LAEFGLVACS SCAAEILHRG KPSMAFHKLI TKNEGIFIAD SNAAMKRILY 420 RFHEKDISRS EMKECFRKSL RYKYFGFFLS NIPFEVLTQT SPHTVRALFR RVEEIKNIRY 480 PALNKLSDQI LSGNEITFDY FENDEQHSCL DSESTWIDTY MDRWFTS 527
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P8K1-F1-model_v4 | 1 | 480 | 13 | 394 | 0.5853 |
0.702 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9J7AFG1 | GT0 | 1 | 495 | 2 | 382 | 0.6952 |
0.8216 |
| AF-A0A5P8NZ82-F1-model_v4 | GT107 | 1 | 494 | 5 | 371 | 0.6821 |
0.8216 |
| UOA17671.1 | GT0 | 3 | 499 | 1 | 377 | 0.6782 |
0.804 |
| A0A8G0ZVZ3 | GT0 | 3 | 496 | 1 | 367 | 0.6759 |
0.8096 |
| AF-Q1GSU0-F1-model_v4 | GT0 | 1 | 494 | 2 | 455 | 0.6696 |
0.7361 |
| AF-A0A2U8PAX7-F1-model_v4 | GT0 | 1 | 497 | 5 | 467 | 0.6685 |
0.7312 |
| AF-A0A2Z5ULE7-F1-model_v4 | GT0 | 1 | 494 | 2 | 455 | 0.6683 |
0.7347 |
| AF-A0A6G9A866-F1-model_v4 | GT0 | 1 | 497 | 5 | 467 | 0.6681 |
0.7308 |
| AF-F2K166-F1-model_v4 | GT0 | 1 | 495 | 4 | 447 | 0.668 |
0.7421 |
| WBE26030.1 | GT0 | 1 | 496 | 8 | 387 | 0.6675 |
0.7968 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P8NZ82 | GT107 | 1 | 494 | 5 | 371 | 0.6821 |
0.8216 |
| A0A5B7Y874 | GT99 | 1 | 501 | 6 | 386 | 0.6511 |
0.7827 |
| A0A1L3LZ65 | GT107 | 1 | 500 | 16 | 342 | 0.5869 |
0.7641 |
| A0A144N4H4 | GT107 | 1 | 468 | 22 | 329 | 0.5844 |
0.774 |
| A0A5B8G4K3 | GT107 | 1 | 500 | 35 | 363 | 0.5826 |
0.7708 |
| A0A7G7FQN9 | GT4 | 1 | 514 | 3 | 504 | 0.5744 |
0.7486 |
| ANK75795.1 | GT107 | 1 | 464 | 3 | 333 | 0.5733 |
0.7417 |
| A0A4P8DTJ6 | GT107 | 1 | 498 | 13 | 317 | 0.5676 |
0.7772 |
| UFI05704.1 | GT107 | 1 | 482 | 38 | 354 | 0.5653 |
0.7812 |
| A0A179D3Y0 | GT107 | 1 | 482 | 2 | 310 | 0.5639 |
0.7664 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6mgb-assembly1.cif.gz_A | 1 | 482 | 7 | 310 | 0.5828 |
0.7702 |
| 8fuw-assembly1.cif.gz_A | 2 | 482 | 1 | 304 | 0.5805 |
0.7617 |
| 6mgc-assembly1.cif.gz_A | 2 | 482 | 1 | 304 | 0.5774 |
0.7613 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P55467-F1-model_v4 | 1 | 501 | 12 | 393 | 0.6531 |
0.7899 |
| AF-Q05014-F1-model_v4 | 1 | 504 | 17 | 417 | 0.5833 |
0.6897 |
| AF-P42218-F1-model_v4 | 1 | 464 | 12 | 389 | 0.5824 |
0.6998 |
| AF-P57038-F1-model_v4 | 1 | 483 | 17 | 414 | 0.5821 |
0.6927 |
| AF-P31858-F1-model_v4 | 9 | 502 | 46 | 421 | 0.4979 |
0.6355 |