PROTEIN: HRGMv2_1504_30_20
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Protein File & Metadata
Source:
HRGMv2_1504_30_20.pdb
Genome ID:
Protein ID:
HRGMv2_1504_30_20
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Protein Sequence
MSSHEQIKRN ILNTPIFTVR NLLLLVLVGS VVVFTFYARM NISSELAYIN VPFYLALVLL 60 AFRFHGKVGV PNAILWAVGA CVLLLTEIIA GVGWKDILKF FFLYCVPLLA CQLSFSLGGA 120 KGFARTIIRI FNTGVLLVFF ILVLDLVSGS AVMDFLTSKF MPEMTSWVSA GLFERHASIW 180 GHYLITAGFY IVFLFVNIAY AKVVGEYLID VRLLYMVATL GVLSTGGKTA LVIYLVSIVW 240 INLTSRHGVR NAVIITVFLL ALYYLGAFDI VLERFGADDL SSGRNDSTRA MFSAELPRLI 300 GGYGERFLAH ASSLIGIDYA SMFAEYSLLA LSYKFGIVYV GFACVLLLWP SFSLARTTDN 360 WIIAFMGVMA LAYFSTFNGL ITIPDTYLLL ALFGICCNSL SEKTLFSN 408
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UII34295.1 | GT4 | 15 | 408 | 14 | 422 | 0.5774 |
0.7887 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 12 | 408 | 15 | 451 | 0.5716 |
0.765 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UII34295.1 | GT4 | 15 | 408 | 14 | 422 | 0.5774 |
0.7887 |
| A0A517MXC4 | GT26 | 12 | 408 | 15 | 451 | 0.5716 |
0.765 |
| A0A5B7R2V6 | GH5_39 | 18 | 408 | 384 | 795 | 0.4931 |
0.6854 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6F7F9-F1-model_v4 | 9 | 403 | 1 | 404 | 0.655 |
0.7865 |