PROTEIN: HRGMv2_0611_4_139
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Protein File & Metadata
Source:
HRGMv2_0611_4_139.pdb
Genome ID:
Protein ID:
HRGMv2_0611_4_139
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Protein Sequence
MLSPLLVFLK NWTLPLAMLA GGIGFPIFRN LSFLTPYLIF TMLLLTFCKV PLEDLKFRPV 60 HIWLLVIQIG GAIAVYSVLS PLNVLVAEGA FICVIAPTAT AAAVITDKLG GSAGSLISYT 120 LLANLGTAIA APALFPLIHP LSHEMSFSMA FLIILQKVFP LLICPFIAAI LLRRFTPGIH 180 KILTSYNETA FYLWAVALIV VMAQTVNTLV NEPEDGWTEI WIALAAGAVC CLQFYIGKRI 240 GSRYRERISG GQSLGQKNTI LAIWMAHVYM SPITAIGAGS YVVWQNIINS WQLWKQRKNI 300 KAGLVDPAKK EV 312
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GHE8-F1-model_v4 | 2 | 310 | 1 | 305 | 0.798 |
0.8357 |
| AF-Q9HYX6-F1-model_v4 | 1 | 309 | 2 | 309 | 0.7928 |
0.8256 |
| AF-Q2FVU6-F1-model_v4 | 1 | 305 | 1 | 305 | 0.7921 |
0.8257 |
| AF-Q8ZKL0-F1-model_v4 | 2 | 308 | 1 | 304 | 0.7913 |
0.8354 |
| AF-Q5PT50-F1-model_v4 | 3 | 306 | 1 | 330 | 0.7347 |
0.8097 |
| AF-Q9I375-F1-model_v4 | 27 | 308 | 6 | 291 | 0.7338 |
0.8132 |
| AF-Q5PT53-F1-model_v4 | 3 | 306 | 1 | 330 | 0.731 |
0.806 |
| AF-K0EW89-F1-model_v4 | 27 | 306 | 5 | 287 | 0.7277 |
0.81 |
| AF-P39836-F1-model_v4 | 8 | 309 | 4 | 325 | 0.7242 |
0.7958 |
| AF-K0FEI7-F1-model_v4 | 3 | 306 | 1 | 327 | 0.7239 |
0.7933 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WIA38770.1 | CBM20 | 1 | 308 | 51 | 658 | 0.5709 |
0.8354 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WIA38770.1 | CBM20 | 1 | 308 | 51 | 658 | 0.5709 |
0.8354 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6lgz-assembly1.cif.gz_A | 2 | 309 | 3 | 304 | 0.7965 |
0.8347 |
| 7cyk-assembly2.cif.gz_B | 7 | 309 | 1 | 296 | 0.7964 |
0.8413 |
| 7cyg-assembly2.cif.gz_B | 7 | 309 | 1 | 299 | 0.796 |
0.8366 |
| 3zuy-assembly1.cif.gz_A | 1 | 305 | 1 | 308 | 0.7955 |
0.8328 |
| 3zux-assembly1.cif.gz_A | 1 | 305 | 1 | 308 | 0.795 |
0.8327 |
| 4n7w-assembly1.cif.gz_A | 2 | 309 | 1 | 305 | 0.7896 |
0.8254 |
| 4n7x-assembly1.cif.gz_A | 1 | 307 | 1 | 306 | 0.7115 |
0.7467 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZKL0-F1-model_v4 | 2 | 308 | 1 | 304 | 0.7913 |
0.8354 |
| AF-P55190-F1-model_v4 | 10 | 308 | 1 | 305 | 0.7901 |
0.8384 |
| AF-O34524-F1-model_v4 | 1 | 306 | 2 | 313 | 0.7868 |
0.8363 |
| AF-Q5PT50-F1-model_v4 | 3 | 306 | 1 | 330 | 0.7347 |
0.8097 |
| AF-Q5PT53-F1-model_v4 | 3 | 306 | 1 | 330 | 0.731 |
0.806 |
| AF-P45946-F1-model_v4 | 7 | 310 | 4 | 346 | 0.7243 |
0.8044 |
| AF-P39836-F1-model_v4 | 8 | 309 | 4 | 325 | 0.7242 |
0.7958 |
| AF-P39879-F1-model_v4 | 4 | 306 | 1 | 325 | 0.7226 |
0.7929 |
| AF-Q0GE19-F1-model_v4 | 1 | 312 | 1 | 337 | 0.7156 |
0.7716 |
| AF-Q6DHK8-F1-model_v4 | 2 | 312 | 2 | 335 | 0.715 |
0.7687 |