PROTEIN: HRGMv2_0556_1_1070
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Protein File & Metadata
Source:
HRGMv2_0556_1_1070.pdb
Genome ID:
Protein ID:
HRGMv2_0556_1_1070
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Protein Sequence
MKKAVLFMIF NRPDPTRKVF EAIREAKPPR LYVAADGPRK NVKGEYEKCI STREIIKEVD 60 WDCEVKTLFR DKNLGCGLAV SGAISWFFEN EEDGIILEDD CLPNQSFFYF CEELLDYYKD 120 NDKIMHIHSN HIGKPYSNYS YYFSSMERCW GWATWRRAWN LYDYKLEKYS YDLIAKKIEE 180 VYFSDFYIDY WKDVLKTMTD DDITKRIDTW DYQWSFSILA NDGLCICPNI NLVSNIGFGK 240 DATHCCYEND PLNNMVSYKI DKITHPPIVK RDLFIDENSM SKNFHYACSD AEYRLNTITS 300 NIRKIVNKLA WYIPIRKLRD KFRDDLCKKI GI 332
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4DMC0-F1-model_v4 | 1 | 280 | 66 | 367 | 0.6268 |
0.7998 |
| AF-Q4D3G6-F1-model_v4 | 1 | 280 | 66 | 367 | 0.6258 |
0.7985 |
| AF-A0A3P7DV18-F1-model_v4 | 1 | 275 | 42 | 300 | 0.6066 |
0.7534 |
| AF-A0A3P7Q5X9-F1-model_v4 | 1 | 304 | 34 | 335 | 0.5846 |
0.6705 |
| AF-A0A044SYE9-F1-model_v4 | 1 | 311 | 48 | 384 | 0.5627 |
0.6634 |
| AF-A0A044SGH9-F1-model_v4 | 1 | 332 | 14 | 423 | 0.5546 |
0.6326 |
| AF-A0A0K0JHB5-F1-model_v4 | 2 | 311 | 76 | 412 | 0.5521 |
0.6634 |
| AF-A0A0R0E9B2-F1-model_v4 | 1 | 280 | 6 | 306 | 0.551 |
0.6916 |
| AF-A0A044S5F1-F1-model_v4 | 2 | 311 | 76 | 413 | 0.55 |
0.662 |
| AF-Q32EF9-F1-model_v4 | 1 | 292 | 4 | 270 | 0.5463 |
0.6574 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D8IDK0-F1-model_v4 | GT0 | 8 | 332 | 1 | 325 | 0.9372 |
0.958 |
| AF-A4SVL4-F1-model_v4 | GT0 | 1 | 294 | 4 | 294 | 0.8634 |
0.9471 |
| AF-C6W1E6-F1-model_v4 | GT0 | 1 | 294 | 4 | 291 | 0.8605 |
0.9603 |
| QWE08948.1 | GT0 | 1 | 293 | 4 | 294 | 0.8583 |
0.9447 |
| AF-A0A2K8T1I5-F1-model_v4 | GT0 | 1 | 328 | 1 | 303 | 0.8556 |
0.9116 |
| AF-A0A6N0LSG4-F1-model_v4 | GT0 | 1 | 328 | 1 | 303 | 0.852 |
0.9082 |
| AF-A0A6P1KTQ9-F1-model_v4 | GT0 | 1 | 293 | 1 | 292 | 0.851 |
0.9392 |
| AF-B2IZQ8-F1-model_v4 | GT0 | 1 | 292 | 1 | 291 | 0.8504 |
0.9421 |
| AF-A0A2L2N2E5-F1-model_v4 | GT0 | 1 | 295 | 1 | 292 | 0.8499 |
0.9382 |
| AF-A0A7D7LC83-F1-model_v4 | GT0 | 1 | 324 | 1 | 299 | 0.8484 |
0.9162 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B1U5H3 | GT13 | 1 | 293 | 5 | 293 | 0.7748 |
0.8689 |
| WBV42548.1 | GT13 | 2 | 300 | 13 | 304 | 0.6536 |
0.7311 |
| A0A1U9NJE5 | GT2 | 1 | 248 | 1 | 191 | 0.6072 |
0.7869 |
| UBM60722.1 | GT2 | 1 | 303 | 3 | 244 | 0.605 |
0.7452 |
| R5FYV9 | GT2 | 1 | 293 | 292 | 578 | 0.6002 |
0.8885 |
| A0A1N7REQ1 | GT2 | 1 | 303 | 6 | 247 | 0.5954 |
0.7377 |
| A0A0P0CK37 | GT2 | 1 | 303 | 9 | 251 | 0.5945 |
0.7391 |
| A0A9X1TSK9 | GT2 | 1 | 303 | 10 | 251 | 0.591 |
0.735 |
| UFH54288.1 | GT2 | 1 | 303 | 3 | 243 | 0.5884 |
0.747 |
| A0ZDI8 | GT4 | 1 | 332 | 6 | 661 | 0.5835 |
0.8907 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2apc-assembly1.cif.gz_A | 1 | 311 | 1 | 333 | 0.5935 |
0.6545 |
| 1fo8-assembly1.cif.gz_A | 1 | 311 | 1 | 321 | 0.5718 |
0.6211 |
| 5ggi-assembly1.cif.gz_A | 1 | 332 | 44 | 394 | 0.5686 |
0.63 |
| 5z8b-assembly1.cif.gz_A | 2 | 255 | 1 | 209 | 0.5606 |
0.7051 |
| 1h7q-assembly1.cif.gz_A | 1 | 284 | 1 | 228 | 0.557 |
0.693 |
| 1qgs-assembly1.cif.gz_A | 1 | 281 | 1 | 226 | 0.5555 |
0.6932 |
| 1h7l-assembly1.cif.gz_A | 1 | 281 | 1 | 227 | 0.5544 |
0.6902 |
| 5vcs-assembly1.cif.gz_A | 1 | 280 | 37 | 333 | 0.5208 |
0.6445 |
| 3pnn-assembly1.cif.gz_A | 1 | 257 | 2 | 287 | 0.5077 |
0.6319 |
| 5ggi-assembly2.cif.gz_B | 1 | 332 | 198 | 551 | 0.499 |
0.6295 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39621-F1-model_v4 | 1 | 284 | 2 | 244 | 0.5568 |
0.6747 |
| AF-Q11068-F1-model_v4 | 1 | 311 | 90 | 435 | 0.5366 |
0.6646 |
| AF-Q9XGM8-F1-model_v4 | 1 | 308 | 104 | 437 | 0.533 |
0.663 |
| AF-P26572-F1-model_v4 | 1 | 308 | 103 | 436 | 0.5311 |
0.6619 |
| AF-P27808-F1-model_v4 | 1 | 311 | 105 | 439 | 0.5268 |
0.6518 |
| AF-P27115-F1-model_v4 | 1 | 311 | 105 | 438 | 0.5258 |
0.6498 |
| AF-Q09325-F1-model_v4 | 1 | 311 | 105 | 438 | 0.5253 |
0.6489 |
| AF-P42407-F1-model_v4 | 1 | 257 | 1 | 260 | 0.5133 |
0.6111 |
| AF-Q9C975-F1-model_v4 | 1 | 276 | 45 | 306 | 0.5064 |
0.6434 |
| AF-Q8T1C6-F1-model_v4 | 1 | 285 | 3 | 411 | 0.4702 |
0.6162 |