PROTEIN: HRGMv2_0556_1_1069
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Protein File & Metadata
Source:
HRGMv2_0556_1_1069.pdb
Genome ID:
Protein ID:
HRGMv2_0556_1_1069
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Protein Sequence
MKKAVLFIIF KREELTNRVF EVIREVKPPR LYVVADGPRE EVKDEYEKCM ATRKVIEKVD 60 WDCEVKTLFR EKNVGCRLSI SGGISWFFEN EEDGIILEDD CLPDKSFFSF CEELLDYYKD 120 NEKIMSIGGF HYGEPCTKYS YYFSSIMQCW GWATWRRAWK HYDANLEKYS YEDICKKIDK 180 IYKDAYMRRH WKDIAYMMKN PEIQKERKVD SWSYTWTISI IQEQGICIDP NVNLVSNIGW 240 GIDSVHCLDP DFYLANTPIS SIDKITHPTK VETSIDIDEY VCHYRFSFRN AEEYIQMLEN 300 DKICLNTKIQ QLENKVKELD TKIKELEMIN SELENTKNNI IINTKTIIDK VAWYIPFKKQ 360 RGKFRENLYK KIGI 374
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4DMC0-F1-model_v4 | 1 | 282 | 66 | 367 | 0.5915 |
0.7923 |
| AF-Q4D3G6-F1-model_v4 | 1 | 281 | 66 | 367 | 0.5908 |
0.7937 |
| AF-Q9XGM8-F1-model_v4 | 1 | 288 | 104 | 405 | 0.4977 |
0.6993 |
| AF-I1K6U7-F1-model_v4 | 1 | 288 | 104 | 405 | 0.4971 |
0.6979 |
| AF-A0A368UI76-F1-model_v4 | 1 | 288 | 104 | 405 | 0.497 |
0.6978 |
| AF-Q09325-F1-model_v4 | 1 | 288 | 105 | 409 | 0.4939 |
0.6965 |
| AF-P27808-F1-model_v4 | 1 | 288 | 105 | 409 | 0.4938 |
0.6956 |
| AF-Q9ARZ1-F1-model_v4 | 1 | 280 | 50 | 336 | 0.4794 |
0.7837 |
| AF-F1QNB2-F1-model_v4 | 1 | 296 | 292 | 646 | 0.4404 |
0.7001 |
| AF-Q91X88-F1-model_v4 | 1 | 296 | 297 | 651 | 0.4394 |
0.7011 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2L2N2E5-F1-model_v4 | GT0 | 1 | 314 | 1 | 308 | 0.8637 |
0.9551 |
| AF-A0A6P1KTQ9-F1-model_v4 | GT0 | 1 | 314 | 1 | 308 | 0.861 |
0.9524 |
| AF-A0A2L2NV30-F1-model_v4 | GT0 | 1 | 314 | 1 | 308 | 0.857 |
0.9483 |
| AF-B2IZQ8-F1-model_v4 | GT0 | 1 | 314 | 1 | 308 | 0.8516 |
0.9427 |
| AF-A0A7D7LC83-F1-model_v4 | GT0 | 1 | 313 | 1 | 308 | 0.835 |
0.9247 |
| AF-A0A2K8T1I5-F1-model_v4 | GT0 | 1 | 309 | 1 | 305 | 0.8311 |
0.9285 |
| AF-A0A6N0LSG4-F1-model_v4 | GT0 | 1 | 309 | 1 | 305 | 0.8308 |
0.9287 |
| AF-A8YI14-F1-model_v4 | GT0 | 1 | 307 | 6 | 307 | 0.8284 |
0.9406 |
| AF-B0CEH0-F1-model_v4 | GT0 | 1 | 321 | 3 | 307 | 0.8283 |
0.9262 |
| AF-C6W1E6-F1-model_v4 | GT0 | 1 | 304 | 4 | 301 | 0.827 |
0.9424 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B1U5H3 | GT13 | 1 | 297 | 5 | 296 | 0.7337 |
0.858 |
| WBV42548.1 | GT13 | 2 | 305 | 13 | 310 | 0.6287 |
0.7277 |
| UBM60722.1 | GT2 | 1 | 299 | 4 | 242 | 0.5727 |
0.7465 |
| A0A1N7REQ1 | GT2 | 1 | 300 | 7 | 245 | 0.5695 |
0.7473 |
| A0A9X1TSK9 | GT2 | 1 | 301 | 11 | 250 | 0.5665 |
0.7426 |
| A0A0P0CK37 | GT2 | 1 | 299 | 9 | 251 | 0.5595 |
0.7281 |
| Q4JYT1 | GT2 | 1 | 308 | 1 | 265 | 0.5592 |
0.7005 |
| UFH54288.1 | GT2 | 1 | 299 | 4 | 241 | 0.558 |
0.7503 |
| R5FYV9 | GT2 | 1 | 294 | 292 | 578 | 0.5569 |
0.8828 |
| C1EGW4 | GT13 | 3 | 288 | 1 | 311 | 0.5562 |
0.6969 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2apc-assembly1.cif.gz_A | 1 | 288 | 1 | 304 | 0.5572 |
0.6969 |
| 1fo8-assembly1.cif.gz_A | 1 | 288 | 2 | 292 | 0.5368 |
0.6603 |
| 5ggi-assembly1.cif.gz_A | 1 | 293 | 44 | 394 | 0.534 |
0.7015 |
| 5vcs-assembly1.cif.gz_B | 1 | 297 | 30 | 304 | 0.5079 |
0.6449 |
| 5vcr-assembly1.cif.gz_A | 1 | 297 | 33 | 332 | 0.5059 |
0.622 |
| 5vcs-assembly1.cif.gz_A | 1 | 297 | 38 | 336 | 0.5007 |
0.617 |
| 5ggi-assembly2.cif.gz_B | 1 | 293 | 198 | 551 | 0.4649 |
0.7013 |
| 5ggf-assembly1.cif.gz_A | 1 | 289 | 201 | 493 | 0.4397 |
0.6645 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9XGM8-F1-model_v4 | 1 | 288 | 104 | 405 | 0.4977 |
0.6993 |
| AF-P26572-F1-model_v4 | 1 | 288 | 103 | 407 | 0.4965 |
0.6976 |
| AF-P27115-F1-model_v4 | 1 | 288 | 105 | 409 | 0.4942 |
0.6968 |
| AF-Q09325-F1-model_v4 | 1 | 288 | 105 | 409 | 0.4939 |
0.6965 |
| AF-P27808-F1-model_v4 | 1 | 288 | 105 | 409 | 0.4938 |
0.6956 |
| AF-Q9C975-F1-model_v4 | 1 | 277 | 45 | 305 | 0.4858 |
0.6479 |
| AF-Q5EAB6-F1-model_v4 | 1 | 297 | 297 | 652 | 0.4396 |
0.6987 |
| AF-Q91X88-F1-model_v4 | 1 | 296 | 297 | 651 | 0.4394 |
0.7011 |
| AF-Q5RCB9-F1-model_v4 | 1 | 296 | 297 | 651 | 0.439 |
0.7005 |
| AF-Q8WZA1-F1-model_v4 | 1 | 296 | 297 | 651 | 0.4389 |
0.7003 |