PROTEIN: HRGMv2_0542_12_11
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Protein File & Metadata
Source:
HRGMv2_0542_12_11.pdb
Genome ID:
Protein ID:
HRGMv2_0542_12_11
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Protein Sequence
MRTITVFFVL CFSILACGQQ IQIPKTTFQT NHLWRPGSDF GTEAVLVYDV NDIDGKDFES 60 RIKTWKIHGY EPQFMISFSW GEDLNHKFKW QTLLSGHPRM HGEVPYFIPD EKYCKDIFNK 120 KIKRAINADI HCIVFEEPEF YINCNPELSD SNKCEILLQT LQYIIALTKQ YAHDQRKDVY 180 CLIATHSIFN YANWGIISPE ILLSKIPQLD GFIGQVWQDT AESSNDSLTT FEHAYLEYAS 240 LAALINSNNK ILYFLTDPVG DEDKSWCEYK DGYLATTVAM MMIGNINRYE ILPWPHRILE 300 YRHPLNKLST KPVKIPEDYL SLILIINQIL RTTPTVADKD TCNILISNEI MNSDGKGNKR 360 THIIERLYQQ LLPIVRKGVP IRFIYKEDST SIKRNNGYIY MPEILSQTNY QNITNTINNL 420 GIINRNYYKT QRGNYIFTYA ISDNGSAKRD VILRGKFIDI LDDKLKVTSS KKVKAGNVSI 480 LYDLSSIKSS KPIILVTGTK DIIKENSDSA FIFFAYGPDK SINKQKIFLP KAPESIMIFN 540 HDGTKISFEQ NYDRKNHLLY LSFPNNHLGC RITIIYN 577
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GP41-F1-model_v4 | 20 | 486 | 7 | 684 | 0.5668 |
0.7556 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UVI32955.1 | CBM9 | 17 | 577 | 30 | 761 | 0.6016 |
0.9052 |
| AF-O54315-F1-model_v4 | GH42 | 25 | 486 | 1 | 645 | 0.5862 |
0.7695 |
| A0A0Q6RKB0 | GH42 | 25 | 486 | 1 | 643 | 0.5856 |
0.7683 |
| AF-A0A5B9FHH8-F1-model_v4 | GH42 | 25 | 486 | 1 | 643 | 0.5853 |
0.7682 |
| AF-Q0GA06-F1-model_v4 | GH42 | 25 | 486 | 1 | 645 | 0.585 |
0.7685 |
| AF-F6DJM7-F1-model_v4 | GH42 | 25 | 486 | 1 | 645 | 0.5848 |
0.7682 |
| AF-A0A0B5ACW3-F1-model_v4 | GH42 | 25 | 486 | 1 | 645 | 0.5848 |
0.7682 |
| AF-Q9X6C6-F1-model_v4 | GH42 | 25 | 486 | 1 | 645 | 0.5841 |
0.7672 |
| AF-Q0GA08-F1-model_v4 | GH42 | 25 | 486 | 1 | 645 | 0.5835 |
0.7663 |
| AF-A0A1B3NWX2-F1-model_v4 | GH42 | 25 | 486 | 1 | 643 | 0.5815 |
0.7634 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UVI32955.1 | CBM9 | 17 | 577 | 30 | 761 | 0.6016 |
0.9052 |
| A0A3Q9HQX5 | GH35 | 16 | 577 | 1 | 794 | 0.5934 |
0.7131 |
| WDR06146.1 | GH42 | 19 | 485 | 1 | 664 | 0.5868 |
0.7751 |
| A0A0Q6RKB0 | GH42 | 25 | 486 | 1 | 643 | 0.5856 |
0.7683 |
| UVI31809.1 | CBM9 | 12 | 577 | 33 | 780 | 0.581 |
0.8963 |
| A0A6P3CWF7 | GH42 | 24 | 486 | 1 | 656 | 0.5791 |
0.7676 |
| A0A7T5EW20 | GH35 | 19 | 577 | 11 | 799 | 0.5752 |
0.6973 |
| A0A8I0KPY9 | GH42 | 25 | 485 | 1 | 652 | 0.5734 |
0.7591 |
| A0A410TPW8 | GH42 | 24 | 485 | 1 | 694 | 0.5713 |
0.7793 |
| A0A6B8RR31 | GH42 | 21 | 488 | 1 | 709 | 0.57 |
0.7685 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1kwg-assembly1.cif.gz_A | 25 | 486 | 1 | 644 | 0.5857 |
0.7689 |
| 6y2k-assembly1.cif.gz_A | 24 | 486 | 1 | 656 | 0.5786 |
0.7646 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O54315-F1-model_v4 | 25 | 486 | 1 | 645 | 0.5864 |
0.7697 |
| AF-O69315-F1-model_v4 | 25 | 486 | 1 | 645 | 0.5852 |
0.7692 |
| AF-Q9X6C6-F1-model_v4 | 25 | 486 | 1 | 645 | 0.5847 |
0.7675 |
| AF-Q8GEA9-F1-model_v4 | 25 | 486 | 1 | 645 | 0.5846 |
0.768 |
| AF-B9LW38-F1-model_v4 | 24 | 485 | 1 | 689 | 0.5766 |
0.7843 |
| AF-P94804-F1-model_v4 | 24 | 485 | 1 | 653 | 0.57 |
0.7576 |